Publications

2017

  • Archer SD, J Stefels, RL airs, T Lawson, TJ Smyth, AP Rees, RJ Geider. 2017. Limitation of dimethylsulfoniopropionate synthesis at high irradiance in natural phytoplankton communities of the Tropical Atlantic. Limnology and Oceanography, DOI: 10.1002/LNO.10625. (August 2017)
  • Sipler RE, D Gong, SE Baer, M Sanderson, QN Roberts, MR Mulholland, D Bronk. 2017. Preliminary estimates of the contribution of Arctic nitrogen fixation to the global nitrogen budget. Limnology and Oceanography Letters, DOI: 10.1002/1012.10046. (July 2017)
  • Baer SE, a. RE Sipler, QN Roberts, PL Yager, ME Frischer, DA Bronk. 2017. Seasonal nitrogen uptake and regeneration in the western coastal Arctic. Limnology and Oceanography, V. 62(6), pp. 2463-2479. (November 2017)
  • Sipler RE, SE Baer, TL Connelly, ME Frischer, QN Roberts, PL Yager, DA Bronk. 2017. Chemical and photophysiological impact of terrestrially- derived dissolved organic matter on nitrate uptake in the coastal western Arctic. Limnology and Oceanography. DOI: 10.1002/lno.10541. (March 2017)
  • Baer SE, MW Lomas, KX Terpis, C Mouginot, AC Martiny. 2017. Stoichiometry of Prochlorococcus, Synechococcus, and small eukaryotic populations in the western North Atlantic Ocean. Environmental Microbiology, DOI: 10.1111/1462- 2920.13672. (January 2017)
  • Wawrik B, DA Bronk, SE Baer, L Chi, M Sun, JT Cooper, Z Yang. 2017. Bacterial utilization of creatine in seawater. Aquatic Microbial Ecology. DOI: 10.3354/ameOl850. (January 2017)
  • He S, RA Barco, D Emerson, EE Roden. 2017. Comparative genomic analysis of neutrophilic iron(II) oxidizer genomes for candidate genes in extracellular electron transfer. Frontiers in Microbiology, DOI: 10.3389/fmicb.2017.01584. (August 2017)
  • Jennings R, JJ Moran, ZJ Jay, J Beam, L Whitmore, MA Kozubal, HW Kreuzer, WP Inskeep. 2017. Integration of metagenomics and stable carbon isotope evidence reveals the extent and mechanisms of carbon dioxide fixation in high-temperature microbial communities. Frontiers in Microbiology V. 8, DOI: 10.3389/fmicb.2017.00088. (February 2017)
  • Mesle M, J Beam, ZJ Jay, B Bodle, E Bogenschutz, WP Inskeep. 2017. Hydrogen peroxide cycling in high-temperature acidic geothermal springs and potential implications for oxidative stress response. Frontiers in Marine Science, V. 4. DOI: 10.3389/fmars.2017.00130. (May 2017)
  • Moran JJ, L Whitmore, ZJ Jay, R de M Jennings, J Beam, HW Kreuzer, WP Inskeep. 2017. Dual stable isotopes of CH4 from Yellowstone hot-springs suggest hydrothermal processes involving magmatic CO2. Journal of Volcanology and Geothermal Research. DOI: 10.1016/j.jvolgeores.2017.05.011. (May 2017)
  • Becraft ED, T Woyke, J Jarett, N Ivanova, F Godoy-Vitorino, NJ Poulton, JM Brown, J Brown. 2017. Rokubacteria: genomic giants among the uncultured bacterial phyla. Frontiers in Microbiology, V. 8, Article: 2264. (November 2017)
  • Becraft ED, J Dodsworth, SK Murugapiran, SC Thomas, I Ohlsson, R Stepanauskas, B Hedlund WD Swingley. 2017. Genomic comparison of two family-level groups of the uncultivated NAG1 archaeal lineage from chemically and geographically disparate hot springs. Frontiers in Microbiology, V. 8. DOI: 10.3389/fmicb.2017.02082. (October 2017)
  • Bhattacharjee AS, AM Motlagh, E Gilcrease, MI Islam, S Casjens, R Goel. 2017. Complete genome sequence of lytic bacteriophage RG-2014 that infects the multidrug resistant bacterium Delftia tsuruhatensis ARB-1. Standards in Genomic Sciences, DOI: 10.1186/s40793-017-0290-y. (November 2017)
  • Weidhaas J, A Panaccione, AS Bhattacharjee, R Goel, A Anderson, SP Acharya. 2017. Whole community transcriptome of a sequencing batch reactor transforming 2,4-dinitroanisole (DNAN) and 3-nirto-1,2,4-triazol-5-one (NTO). Biodegradation, pp. 1-18. (November 2017)
  • Pappu AR, AS Bhattacharjee, S Dasgupta, R Goel. 2017. Nitrogen cycle in engineered and natural ecosystems- past and current. Current Pollution Reports, V. 3(2), pp. 120-140. (June 2017)
  • Bhattacharjee AS, S Wu, SE Lawson, JSM Jetten, V Kapoor, JS Domingo, K Mcmahon, DR Noguera, R Goel. 2017. Whole community metagenomics in two different anammox configurations: process performance and community structure. Environmental Science and Technology, DOI: 10.1021/acs.est.6b05855. (March 2017)
  • Leavitt JC, AJ Heitkamp, AS Bhattacharjee, EB Gilcrease, S Casjens. 2017. Genome sequence of Escherichia coli tailed phage Utah. Genome Announcements, V. 5(13): e01494-16. (March 2017)
  • Lawson CE, S Wu, AS Bhattacharjee, JJ Hamiilton, K Mcmahon, R Goel, DR Noguera. Metabolic network analysis reveals microbial community interactions in anammox granules. Nature Communications, DOI: 10.1038/ncomms15416. (May 2017)
  • Carr SA, F Schubotz, RB Dunbar, CT Mills, R dias, RE Summons, KW Mandernack. 2017. Acetoclastic Methanosaeta are dominant methanogens in organic-rich Antarctic marine sediments. ISME Journal, DOI: 10.1038/ismej.2017.150. (October 2017)
  • Caron DA, Pe Connell, RA Schaffner, A Schnetzer, JA Fuhrman, PD Countway, DY Kim. 2017. Planktonic food web structure at a coastal timeseriessite: I. Partitioning of microbial abundances and carbon biomass. Deep Sea Research Pt. l: Oceanographic Research Papers. DOI: 10.1016/j.dsr.20l6.l2.Ol3. (January 2017)
  • Mori JF, JJ Scott, KW Hager, CL Moyer, K Kusel, D Emerson. 2017. Physiological and ecological implications of an iron- or hydrogen-oxidizing member of the Zetaproteobacteria, Ghiorsea bivora, gen.nov., sp. Nov. ISME Journal, V. 11(11), pp. 2624-2636. (November 2017)
  • Vesenka J, J Havu, D Emerson. 2017. A model for sheath formation coupled to motility in Leptothrix ochracea. Geomicrobiology Journal (in press)
  • Emerson D, JJ Scott, A Leavitt, E Fleming, C Moyer. 2017. In situ estimates of iron-oxidation and accretion rates for iron-oxidizing bacterial mats at Lo'ihi Seamount. Deep-Sea Research Pt. I: Oceanographic Research Papers (in press)
  • Fields DM, AB Skirtesvik, H Browman. 2017. Behavioural responses of infective-stage copoepodids of the salmon louse (Lepeophtheirussalmonis, Copepoda:Caligidae) to host-related sensory cues. Journal of Fish Diseases, DOI: 10.1111/jfd.12690. (September 2017)
  • Bailey A, P De Wit, P Thor, H Browman, RM Bjelland, S Shema, DM Fields, JA Runge, C Thompson, H Hop. 2017. Regulation of gene expression is associated with tolerance of the Arctic copepod Calanus glacialis to CO2-acidified sea water. Ecology and Evolution, DOI: 10.1002/ece3.3063. (August 2017)
  • Wilson W, IC Gilg, M Moniruzzaman, E Field, S Koren, GR LeCleir, J Martinez Martinez, NJ Poulton, BK Swan, R Stepanauskas, S Wilhelm. 2017. Genomic exploration of individual giant ocean viruses. The ISME Journal. DOI: 10.1038/ismej.2017.61. (May 2017)
  • Goordial J, I Altshuler, K Hindson, K Chan-Yam, E Marcolefas, LG Whyte. 2017. In situ field sequencing and life detection in remote (79 degrees 26’N) Canadian high arctic permafrost ice microbial communities. Frontiers in Microbiology, V. 8, Article 2594. (December 2017)
  • Brady AL, J Goordial, HJ Sun, LG Whyte, GF Slater. 2017. Variability in carbon uptake and (re)cycling in Antarctic cryptoendolithic microbial ecosystems demonstrated through radiocarbon analysis or organic biomarkers. Geobiology, DOI: 10.1111/gbi.12263. (October 2017)
  • Hobbie JE, GR Shaver, EB Rastetter, JE Cherry, SJ Goetz, K Guay, WA Gould, GW Kling. 2017. Ecosystem responses to climate change at a low Arctic and a high Arctic long-term research site. AMBIO A Journal of the Human Environment. V. 46(S1), pp. 160-173. (February 2017)
  • Henson S, HS Cole, J Hopkins, A Martin, A Yool. 2017. Detection of climate change-driven trends in phytoplankton phenology. Global Change Biology, DOI: 10.1111/gcb.13886. (September 2017)
  • LaBonte JM, MA Lever, KJ Edwards, BN Orcutt. 2017. Influence of igneous basement on deep sediment microbial diversity on the Eastern Juan de Fuca Ridge Flank. Frontiers in Microbiology, V. 8:Article 1434. (August 2017)
  • Smith, HEK, AJ Poulton, R Garley, J Hopkins, LC Lubelczyk, DT Drapeau, S Rauschenberg, BS Twining, NR Bates, WM Balch. 2017. The influence of environmental variability on the biogeography of coccolithophores and diatoms in the Great Calcite Belt. Biogeosciences, V. 14(21), pp. 4905-4925. (November 2017)
  • Mordy CW, AH Devol, L Eisner, N Kachel, C Ladd, MW Lomas, P Proctor, RN Sambrotto, SH Shull, PJ Stabeno, E Wisegarver. 2017. Nutrient and phytoplankton dynamics on the inner shelf of the eastern Bering Sea. Journal of Geophysical Research: Oceans, DOI: 10.1002/2016JC012071. (February 2017)
  • Dueker ME, GD O’Mullan, J Martinez Martinez, AR Juhl, KC Weathers. 2017. Onshore wind speed modulates microbial aerosols along an urban waterfront. Atmosphere, V. 8(11), Article: 215. (November 2017)
  • Dheilly NM, D Bolnick, S Bordenstein, PJ Brindley, C Figueres, EC Holmes, J Martinez Martinez, AJ Phillips, R Poulin, K Rosario. 2017. Parasite microbiome project: systematic investigation of microbiome dynamics within and across parasite-host interactions. mSystems, V. 2(4), e00050-17 (July 2017)
  • Martinez-Hernandez F, O Fomas, M Lluesma Gomez, B Bolduc, MJ de Ia Cruz Pena, J Martinez Martinez, J Anton, JM Gasol, R Rosselli, F RodriquezValera, MB Sullivan, SG Acinas, M Martinez-Garcia. 2017. Single-virus genomics reveals hidden cosmopolitan and abundant viruses. Nature Communications. V. 8, Artide no. 15892.
  • Middleton JE, J Martinez Martinez, WH Wilson, NR Record. 2017. The functional dynamics of Emiliania hyxleyi virus-host interactions across multiple scales. Limnology and Oceanography DOI: 10.1002/ino.10476. (February 2017)
  • Gabric A, P Matrai, G Jones, J Middleton. 2017. The nexus between sea ice and polar emissions of marine biogenic aerosols. Bulletin of the American Meteorological Society. DOI: 10.1175/BAMS-D-16-0254.1. (July 2017)
  • Wheat CG, AT Fisher, J McManus, SM Hulme, BN Orcutt. 2017. Cool seafloor hydrothermal springs reveal global geochemical fluxes. Earth and Planetary Science Letters, V. 476, pp 179-188. (October 2017)
  • Baronas JJ, DE Hammond, J McManus, CG Wheat, C Siebert. 2017. A global Ge isotope budget. Geochimica et Cosmochimica Acta. V. 203, pp. 265-283. (January 2017)
  • Little SH, D Vance, J McManus, S Severmann, TW Lyons. 2017. Copper isotope signatures in modern marine sediments. Geochimica et Cosmochimica Acta, V. 212, pp. 253-273. (September 2017)
  • Nabi D, S Katz, C Aeppli, 2017. Are oxygenated hydrocarbons important oil degradation products after oil spills? International Oil Spill Conference Proceedings, V. 2017, No.1, pp. 571-588. (May 2017)
  • Dall’Olmo, RJW Brewin, F Nencioli, E Organelli, I Lefering, D McKee, R Rottgers, C Mitchell, E Boss, A Bricaud, G Tilstone. 2017. Determination of the absorption coefficient of chromophoric dissolved organic matter from underway spectrophotometry. Optics Express, V. 25(24), pp. A1079-A1095. (November 2017)
  • Mitchell C, C Hu, B Bowler, D Drapeau, WM Balch. 2017. Estimating particulate inorganic carbon concentrations of the global ocean from ocean color measurements using a reflectance difference approach. Journal of Geophysical Research: Oceans, DOI: 10.1002/2017JC013146. (October 2017)
  • Samanipour S, P Dimitriou-Christidis, D Nabi, JS Arey. 2017. Elevated concentrations of 4-Bromobiphenyl and 1,3,5-Tribromobenzene found in deep water of Lake Geneva based on GCxGC-ENCI- TOFMS and GCxGC-uECD. ACS Omega, V. 2(2), pp. 641-652. (February 2017)
  • Nabi D, JS Arey. 2017. Predicting partitioning and diffusion properties of nonpolar chemicals in biotic media and passive sampler phases by GC x GC. Environmental Science and Technology, DOI: 10.1021/acs.est.6b05071. (February 2017)
  • McClenachan L, G O’Connor, BP Neal, JM Pandolfi, JBC Jackson. 2017. Ghost reefs: nautical charts document large spatial scale of coral reef loss over 240 years. Science Advances, V. 3(9), e1603155. (September 2017)
  • Neal BP, A Khen, T Treibitz, O Beijbom, G O’Connor, MA Coffroth, N Knowlton, D Kriegman, BG Mitchess, DI Kline. 2017. Caribbean massive corals not recovering from repeated thermal stress events during 2005-2013. Ecology and Evolution, V. 7(5), pp. 1339-1353. (March 2017)
  • Hawco NJ, PJ Lam, JM Lee, D Ohnemus, A Noble, NJ Wyatt, MC Lohan, MA Saito. 2017. Cobalt scavenging in the mesopelagic ocean and its influence on global mass balance: synthesizing water column and sedimentary fluxes. Marine Chemistry, DOI: 10.1016/j.marchem,2017.09.001. (September 2017)
  • Ohnemus D, PJ Lam, BS Twining. 2017. Optical observation of particles and responses to particle composition in the GEOTRACES GP16 section. Marine Chemistry, DOI: 10.1016/jmarchem.2017.09.004. (September 2017)
  • Kohut JT, AB Kustka, MR Hiscock PJ Loam, C Measures, A Miilligan, A White, F Carvalho, M Hatta, BM Jones, DC Ohnemus, JM Swartz. 2017. Mesoscale variability of the summer bloom over the northern Ross Sea shelf: a tale of two banks. Journal of Marine systems, V. 166, pp. 50-60. (January 2017)
  • Ohnemus DC, S Rauschenberg, GA Cutter, JN Fitzsimmons, RM Sherrell, BS Twining. Elevated trace metal content of prokaryotic communities associated with marine oxygen deficient zones. Limnology and Oceanography, V. 62(1), PP. 3-25. (January 2017)
  • Brzezinski MA, JW Krause, SB Baines, JL Collier, D Ohnemus. 2017. Patterns and regulation of silicon accumulation in Synechococcus spp. Journal of Phycology, DOI: 10.1111/jpy.12545. (April 2017)
  • Noble A, D Ohnemus, NJ Hawco, PJ Lam, MA Saito. 2017. Coastal sources, sinks and strong organic complexation of dissolved cobalt within the US North Atlantic GEOTRACES transect GAO3. Biogeosciences. V. 14(11), pp. 2715-2739. (June 2017)
  • Orcutt BN, M Bergenthal, T Freudenthal, D Smith, Md Lilley, L Schneiders, S Green, G L Fruh-Green. 2017. Contamination tracer testing with seabed drills: IODP Expedition 357. Scientific Drilling, V. 23, pp. 39-46. (November 2017)
  • Orcutt BN, LL Lapham, J Delaney, N Sarode, KS Marshall, KJ Whaley-Martin, G Slater, CG Wheat, PR Girguis. 2017. Microbial response to oil enrichment in Gulf of Mexico sediment measured using a novel long-term benthic lander system. Elementa Science of the Anthropocene. V. 5, pp. 18+. (April 2017)
  • Fruh-Green GL, BN Orcutt, SL Green, C Cotterill, and the Expedition 357 Scientists. 2017. Atlantis Massif serpentinization and life. Expedition 357 of the mission-specific drilling platform from and to Southampton, United Kingdom Sites M0068-M0076, 26 October-11 December 2015. Proceedings of the International Ocean Discovery Program (IODP), V. 357. ( February 2017)
  • Orcutt BN, JB Sylvan, CM Santelli. 2017. Recent advances in geomicrobiology of the ocean crust. Frontiers in Microbiology V. 8. (July 2017)
  • Pachiadaki MG, E Sintes, K Bergauer, JM Brown, NR record, BK Swan, ME Mathyer, SJ Hallam, P Lopez-Garcia, Y Takaki, T Nunoura, T Woyke, GJ Herndl, R Stepanauskas. 2017. Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation. Science, V. 358, Issue 6366, pp. 1046-1051. (November 2017)
  • Suter E, MG Pachiadaki, GT Taylor, YM Astor, V Edgcomb. 2017. Free-living chemoautotrophic and particle-attached heterotrophic prokaryotes dominate microbial assemblages along a pelagic redox gradient: particle-associated microbes in a redox gradient. Environmental Microbiology, DOI: 10.1111/1462-2920.13997. (November 2017)
  • Edgcomb V, L Medina, CD Taylor, M Pachiadaki, CA Henriquez-Castillo, O Ulloa. 2017. A review of protest grazing below the photic zone emphasizing studies of oxygen-depleted water columns and recent applications of in situ approaches. Frontiers in Marine Science 4, DOI: 10.3389/fmars.2017.00105. (April 2017)
  • Alberti A, J Poulain, S Engelen…..N Poulton, R Stepanauskas……. 2017. Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition. Scientific Data, V. 4: 170093. (August 2017)
  • Dashkova V, D Malashenkov, NJ Poulton, I Vorobjev, NS Barteneva. 2017. Imaging flow cytometry for phytoplankton analysis. Methods, V. 112, pp.188-200. (January 2017)
  • Rasher DB, AS Hoey, ME Hay. 2017. Cascading predator effects in a Fijian coral reef ecosystem. Scientific Reports, V. 7(1), Article: 15684. (December 2017)
  • Hattenrath-Lehmann TK, RJ Ossiboff, CA Burnell, CD Rauschenberg, K Hynes, RL burke, EM Bunting, K Durham, CJ Gobler. 2017. The role of PSP-producing Alexandrium bloom in an unprecedented diamondback terrapin (Malaclemys terrapin) mortality event in Flanders Bay, New York, USA. Toxicon, V. 129, pp. 36- 43. (April 2017)
  • Thomas AC, AJ Pershing, KD Friedland, JA Nye, KE Mills, MA Alexander, NR Record, R Weatherbee, ME Henderson. 2017. Seasonal trends and phenology shifts in sea surface temperature on the North American northeastern continental shelf. Elementa Science of the Anthropocene, V. 5, Article 48. (August 2017)
  • Record NR. 2017. A people’s science. Limnology and Oceanography. Bulletin. DOI:10.1002/lob.10171. (March 2017)
  • Mori J, JJ Scott, K Hager, CL Moyer, K Kusel, D Emerson. 2017. Physiological and ecological implications of an iron- or hydrogen-oxidizing member of the Zetaproteobacteria, Ghiorsea bivora, gen. nov. sp. Nov. The ISME Journal, DOI: 10.1038/jsmej.2017.132. (August 2017)
  • Scott JJ, BT Glazer, D Emerson. 2017. Bringing microbial diversity into focus: high-resolution analysis of iron mats from the Lo’ihi Seamount. Environmental Microbiology, V. 19, pp. 301-306. (January 2017)
  • Guy-Haim T, H Alexander, TW Bell … K Stamieszkin. 2017. What are the type, direction, and strength of species, community, and ecosystem responses to warming in aquatic mesocosm studies and their dependency on experimental characteristics? A systematic review protocol. Environmental Evidence, V. 6(1). (March 2017)
  • Ceccarelli D, G Garriss, SY Choi, NA Hasan, R Stepanauskas, M Pop, A Huq, RR Colwell. 2017. Characterization of two cryptic plasmids isolated in Haiti from clinical Vibrio cholera non-01/non-0139. Frontiers in Microbiology, V.8, Article: 2283. (November 2017)
  • Bowers RM, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ….. ED Becraft…… 2017. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology, V. 35(8), pp. 725-731. (August 2017)
  • Royo-Llonch M, I Ferrera, F MC Castillo, P Sanchez, G Salazar Guiral, R Stepanauskas, JM Gonzalez, M Sieracki, S Speich, L Stemmann, C Pedros-Alio, SG Acinas. 2017. Exploring microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the tropical Indian Ocean via single amplified genomes. Frontiers in Microbiology, V. 8: Article 1317. (July 2017)
  • Luo H, Y Huang, R Stepanauskas, J Tang. 2017. Excess of non-conservative amino acid changes in marine bacterioplankton lineages with reduced genomes. Nature Microbiology, (in press) (April 2017)
  • Choi J, F Yang, R Stepanauskas, E Cardenas, A Garoutte, R Williams, J Flater, JM Tiedje, KS Hofmockel, B Gelder, A Howe. 2017. Strategies to improve reference databases for soil microbiomes. The ISME Journal, V. 11(4), pp. 829-834. (April 2017)
  • Kashtan N, SE Roggensack, JW Berta-Thompson, M Grinberg, R Stepanauskas, SW Chisholm. 2017. Fundamental differences in diversity and genomic proulation structure between Atlantic and Pacific Prochlorococcus. The ISME Journal, DOI: 10.1038/ismeg.2017.64 (May 2017)
  • Landry Z, BK Swan, GJ Herndl, R Stepanauskas, SJ Giovannoni. 2017. SAR202 genomes from the dark ocean predict pathways for the oxidation of recalcitrant dissolved organic matter. mBio, V. 8(2): e00413-17. (May 2017)
  • Jungbluth SP, TG Del Rio, SG Tringe, R Stepanauskas, MS Rappe. 2017. Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems. PeerJ, V. 5(e3134): pp. 1-22. (May 2017)
  • Collingro A, S Kostlbacher, M Mussmann, R Stepanauskas, SJ Hallam, M Horn. 2017. Unexpected genomic features in widespread ingtracellular bacteria: evidence for motility of marine chlamydiae. The ISME Journal. V. 11(10), pp 2334-2344. (October 2017)
  • Luo H, Y Huang, R Stepanauskas, J Tang. 2017. Excess of non-conservative amino acid changes in marine bacterioplankton Iineages with reduced genomes. Nature Microbiology, V. 2: Article 17091. (June 2017)
  • Garcia SL, SLR Stevens, B Crary, MM Garcia, R Stepanauskas, T Woyke, SG Tringe, SGE Andersson, S Bertilsson, RR Malmstrom, K Mcmahon. 2017. Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations. The ISME Journal, DOI: 10.1038/s41396-017-0001-0.(December 2017)
  • Stepanauskas R, EA Fergusson, J Brown, NJ Poulton, B Tupper, JM Labonte, ED Becraft, JM Brown, MG Pachiadaki, T Povilaitis, BP Thompson, CJ Mascena, WK Bellows, A Lubys. 2017. Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles. Nature Communications. V. 8, Article 84. (July 2017)
  • Hawley AK, MK Nobu, JJ Wright, WE Durno, C Morgan-Lang, B Sage, P Schwientek, BK Swan, C Rinke, M Torres-Beltran, K Mewis, WT Liu, R Stepanauskas, T Woyke, SJ Hallam. 2017. Nature Communications, V. 8(1), Article: 1507. (December 2017)
  • Cohen NR, KA Ellis, RH Lampe, H McNair, BS Twining, MT Maldonado, MA Brzezinski, FI Kuzminov, K Thamatrakoln, CP Till, KW Bruland, WG Sunda, S Bargu, A Marchette. 2017. Diatom transcriptional and phbysiological responses to changes in iron bioavailability across ocean provinces. Frontiers in Marine Science, V. 4, Article 360. (November 2017)
  • Saito MA, A Noble, N Hawco, BS Twining, D Ohnemus, SG John, P Lam, TM Conway. 2017. The acceleration of dissolved cobalt’s ecological stoichiometry due to biological uptake, remineralization, and scavenging in the Atlantic Ocean. Biogeosciences, V. 14(20), pp. 4637-4662. (October 2017)
  • Boyd PW, MJ Ellwood, A Tagliabue, BS Twining. 2017. Biotic and abiotic retention, recycling and remineralization of metals in the ocean. Nature Geoscience, V. 10(3), pp. 167-173. (March 2017)
  • Glass JB, S Chen, KS Dawson, DR Horton, S Vogt, ED Ingall, BS Twining, VJ Orphan. 2017. Trace metal imaging of sulfate-reducing bacteria and methanogenic archaea at single-cell resolution by synchrotron X-ray fluorescence imaging. Geomicrobiology, DOI: 10.1080/01490451.2017.1321068. (April 2017)
  • Krause JW, MA Brzezinski, SB Baines, JL Collier, BS Twining, D Ohnemus. 2017. Picoplankton contribution to biogenic silica stocks and production rates in the Sargasso Sea. Global Biogeochemical Cycles, DOI: 10.1002/2017GB005619. (May 2017)

2016

  • Bagby SC, CM Reddy, C Aeppli, GB Fisher, D Valentine. 2016. Persistence and biodegradation of oil at the ocean floor flowing Deepwater Horizon. Proceedings of the National Academy of Sciences, Vol. 114 (1), E9-E18. (December 2016)
  • Nelson RK, C Aeppli, J Samuel, H Chen, AHB Oliveira, C Eiserbeck...et al. 2016. "Applications of comprehensive two-dimensional gas chromatography (GCxGC) in studying the source, transport, and fate of petroleum hydrocarbons in the environment." In: Standard Handbook of Oil Spill Environmental Forensics: Fingerprinting and source Identification. 2nd ed. Chapter 8, Editors: Scott Stout, Zhendi Wang. Elsevier, pp. 399-448. (January 2016)
  • White HK, CH Wang, PL Williams, DM Findley, A Thurston, R Simister, C Aeppli, RK Nelson. 2016. Long-term weathering and continued oxidation of oil residues from the Deepwater Horizon spill. Marine Pollution Bulletin, DOI: 10.1016/j.marpolbul.20l6.lO.029. (October 2016)
  • Randolph K, HM Dierssen, A Cifuentes-Lorenzen, WM Balch, EC Monahan, CJ Zappa, DT Drapeau, Bowler. 2016. Novel methods for optically measuring whitecaps under natural wave breaking conditions in the Southern Ocean. Journal of Atmospheric and Oceanic Technology, DOI: 10.1175/JTECH-D-16-0086-1. (December 2016)
  • Balch WM, T Huntington, G Aiken, D Drapeau, B Bowler, L Lubelczyk, K Butler. 2016. Toward a quantitative and empirical dissolved organic carbon budget for the Gulf of Maine, a semienclosed shelf sea. Global Biogeochemical Cycles, V. 30, pp. 268-292. (February 2016)
  • Valente A, S Sathyendranath, V Brotas........WM Balch. 2016. A compilation of global bio-optical in situ data for ocean-colour satellite applications. Earth Systems Science Data Discussions. V. 8(1), pp. 235-252. (June 2015)
  • Maranon E, WM Balch, P Cermeno, N gonzalez, C Sobrino, A Fernandez, M Huete-Ortega, DC Lopez-Sandoval, M Delgado, M Estrada, M alvarez, E Fernandez-Gaullart, C Pelejero. 2016. Coccolithophore calcification is independent of carbonate chemistry in the tropical ocean. Limnology and Oceanography, V. 61(4), pp. 1345-1357. (May 2016)
  • Valente A, S Sathyendranath, V Broptas, S Groom, M Grant, M Taberner, D Antoine, R Arnone, WM Balch, et al. 2016. A compilation of global bio-optical in situ data for ocean-colour satellite applications. Earth System Science Data, V. 8, pp. 238-252. (June 2016)
  • Balch WM, NR Bates, PJ Lam, S Rauschenberg. 2016. Factors regulating the Great Calcite Belt in the Southern Ocean and its biogeochemical significance: regulation of the Great Calcite Belt. Global Biogeochemical Cycles, DOI: 10.1002/2016GB005414. (June 2016)
  • Huntington TG, WM Balch, GR Aiken, P Camill. 2016. Climate change and dissolved organic carbon export to the Gulf of Maine. Journal of Geophysical Research: Biogeosciences, DOI: 10.1002/2015.JGOO3314. (September 2016)
  • Ramirez GA, CL Hoffman, MD Lee, RA Lesniewski, RA Barco, A Karber, BM Toner, CG Wheat, KJ Edwards, BN Orcutt. 2016. Assessing marine microbial induced corrosion at Santa Catalina Island, California. 2016. Frontiers in Microbiology, V. 7, Article 1679. (October 2016)
  • Beam JP, HC Bernstein, ZJ Jay, MA Kozubal, RM Jennings, SG Tringe, WP Inskeep. 2016. Assembly and succession of iron oxide microbial mat communities in acidic geothermal springs. Frontiers in Microbiology, V. 7: Article 25. (February 2016)
  • Jay ZJ, J Beam, MA Kozubal, R dM Jennings, DB Rusch, WP Inskeep. 2016. The distribution, diversity and function of predominant Thermoproteales in high-temperature environments of Yellowstone National Park. Environmental Microbiology, DOI: 10.1111/1462-2920.13366. (April 2016)
  • Melendrez MC, ED Becraft, JM Wood, MT Olsen, BA Bryant, JF Heidelberg, DB Rusch, FM cohan, DM Ward. 2016. Recombination does not hinder formation or detection of ecological species of Synechococcus inhabiting a hot spring cyanobacterial mat. Frontiers in Microbiology, V. 6: Article 1540. (January 2016)
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  • Henri P, C Rommevaux-Jestin, A Godfroy, F Lesongeur, A Mumford, D Emerson, B Menez. 2016. Structural iron(II) of basaltic glass as an energy source for Zetaproteobacteria in an abyssal plain environment off the Mid-Atlantic Ridge. Frontiers in Microbiology, V. 6:Article 1518. (January 2016)
  • Emerson D, C Lydell. 2016. Inventory of cultivatable populations of S-cycling, dermentative, Fe-reducing, and aerobic heterotrophic bacteria from saltmarsh sediments. bioRxiv, DOI: http://dx.doi.org/10.1101/048611. (April 2016)
  • McBeth JM, D Emerson. 2016. In situ microbial community succession on mild steel in estuarine and marine environments: exploring the role of iron-oxidizing bacteria.l Frontiers in Microbiology, V. 7: Article 767. (May2016)
  • Chan CS, SM McAllister, AH Leavitt, BT Glazer, D Emerson. 2016. The architecture of iron microbial mats reflects the adaptation of chemolithotrophic iron oxidation in freshwater and marine environments. Frontiers in Microbiology, V. 7:Article 796. (June 2016)
  • Chan CS, D Emerson, GW Luther III. 2016. The role of microaerophilic Fe-oxidizing microorganisms in producing banded iron formation. Geobiology. V. 14(5), pp. 509-528 (July 2016)
  • Mumford A, IJ Adaktylou, D Emerson. 2016. Peeking under the Iron Curtain: development of a microcosm for imaging colonization of steel surfaces by Mariprofundus sp. DIS-1, an oxygen tolerant Fe-oxidizing bacterium. Applied and Environmental Microbiology, DOI: 10.1128/AEM.01990-16. (September 2016)
  • Van Voorhis WC, JA Fernandez Robledo, YA Resto, et al. 2016. Open source drug discovery with the malaria box compound collection for neglected diseases and beyond. PLoS Pathogens, V. 12(7): e1005763. (July 2016)
  • Zarubin M, Y Lindemann, O Brunner, DM Fields, HI Browman, A Genin. 2016. The effect of hydrostatic pressure on grazing in three calanoid copepods. Journal of Plankton Research, V. , pp. 1-8. (January 2016)
  • Runge JA, DM Fields, CRS Thompson, SD Shema, RM Bjelland, CMF Durif, AB Skiftesvik, HI Browman. 2016. End of the century CO2 concentrations do not have a negative effect on vital rates of Calanus finmarchicus, an ecologically critical planktonic species in North Atlantic ecosystems. ICES Journal of Marine Science, V. pp.  (January 2016)
  • Bailey A, P Thor, H Browman, DM Fields, JA Runge, A Vermont, RM Bjelland, C Thompson, S Shema, C Durif, H Hop. 2016. Early life stages of the Arctic copepod Calanus glacialis are unaffected by increased seawater pCO2. ICES Journal of Marine Science, DOI: 10.1093/icesjms/fsw066. (April 2016)
  • Waller JD, RA Wahle, H McVeigh, DM Fields. 2016. Linking rising pCO2 and temperature to the larval development and physiology of the American lobster (Homarus americanus). ICES Journal of Marine Science, DOI: 10.1093/icesjms/fswl54. (September 2016)
  • Gilg IC, SD Archer, SA Floge, DM Fields, AI Vermont, AH Leavitt, WH Wilson, J Martinez Martinez. 2016. Differential gene expression is tied to photochemical efficency reduction in virally infected Emiliania huxleyi. Marine Ecology Progress Series, V. 555, pp. 13-27. (August 2016)
  • Chan CS, SM McAllister, AH Leavitt, BT Glazer, ST Krepski, D Emerson. 2016. The architecture of iron microbial mats reflects the adaptation of chemolithotrophic iron oxidation in freshwater and marine environments. Frontiers in Microbiology, V. 7: Article 796. (June 2016)
  • Lee YJ,PA Matrai, MAM Friedrichs, VS Saba, O Aumont, M Babi, et al. 2016. Net primary productivity estimates and environmental variables in the Arctic Ocean: an assessment of coupled physical-biogeochemical models. Journal of Geophysical Research: Oceans, DOI: 10.1002/2016.JC011993. (November 2016)
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  • Jin M, EE Popova, J Zhang, R Ji, D Pendleton, O Varpe, A Yool, YJ Lee. 2016. Ecosystem model intercomparison of under-ice and total primary productioln in the Arctic Ocean. Journal of Geophysical Research: Oceans, V. 121(1), pp. 934-948. (January 2016)
  • Sigler MF, JM Napp, RJ Stabeno, RA Heintz, ML Lomas, GL Hunt. 2016. Variation in annual production of copepods, euphausiids, and juvenile walleye pollock in the southeastern Bering Sea. Deep-Sea Research Pt. II: Topical Studies in Oceanography, DOI: 10.1016/j.dsr2.2016.01.003. (January 2016)
  • Montes E, FE Muller-Karger, A Cianca, MW Lomas, L Lorenzoni, S Habtes. 2016. Decadal variability in the oxygen inventory of North Atlantic subtropical underwater captured by sustained, long-term oceanographic time-series observations. Global Biogeochemical Cycles, V. 30, pp. 460-478 (January 2016)
  • Tin HC, MW Lomas, J Ishizaka. 2016. Satellite-derived estimates of primary production during the Sargasso Sea winter/spring bloom: integration of in-situ time-series data and ocean color remote sensing observations. Regional Studies in Marine Science, V. 3, pp. 131-143. (January 2016)
  • Banas NS, J Zhang, RG Campbell, NR Sambrotto, MW Lomas, E Sherr, B Sherr, C Ashjian, D Stoecker, EJ Lessard. 2016. Spring planktondynamics in the Eastern Bering Sea, 1971-2050: mechanisms of interannual variability diagnosed with a numberical model. Journal of Geophysical Research: Oceans, V. 121(2), pp. 1476-1501. (February 2016)
  • Cotti-Rausch BE, MW Lomas, EM Lachenmyer, EA Goldman, DW Bell, SR Goldberg, TL Richardson. 2016. Mesoscale and sub-mesoscale variability in phytoplankton community composition in the Sargasso Sea. Deep-Sea Research Pt.I: Oceanographic Research Papers, V. 110, pp. 106-122. (April 2016)
  • Montes E, F Muller-Karger, MW Lomas, A Cianca, L Lorenzoni, S Habtes. 2016. Decadal variability in the oxygen inventory of North Atlantic subtropical underwater captured by sustained, long-term oceanographic time-series observations. Global Biogeochemical Cycles, V. 30(3), pp. 460-478. (March 2016)
  • Hoang TC, AJ Cole, RK Fotedar, MJ O'Leary, MW Lomas, S Roy. 2016. Seasonal changes in water quality and Sargassum biomass in southwest Australia. Marine Ecology Progress Series V. 551, pp. 63-79. (June 2016)
  • Liu CL, L Zhai, SI Zeeman, L Eisner, JC Gann, CW Mordy, SB Moran, MW Lomas. 2016. Seasonal and geographic variations in modeled primary production and phytoplankton losses from the mixed layer between warm and cold years on the eastern Bering Sea shelf. Deep-Sea Research Pt.I: Topical Studies in Oceanography, DOI: 10.1016/j.dsr2.2016.07.008. (July 2016)
  • Van Pelt, JM Napp, CJ Ashjian, HR Harvey, MW Lomas, MF Sigler, PJ Stabeno. 2016. An introduction and overview of the Bering Sea Project: Volume IV. Deep-Sea Research PT II: Topical Studies in Oceanography, DOI: 10.1016/j.dsr2.20l6.09/002. (September 2016)
  • Vermont AI, J Martinez Martinez, JD Waller, IC Gilg, AH Leavitt, SA Floge, SD Archer, WH Wilson, DM Fields. 2016. Virus infection of Emiliania huxleyi deters grazing by the copepod Acartia tonsa. Journal of Plankton Research, DOI: 10.1093/plankt/fbw064. (September 2016)
  • NA Murray, JM Muratli, AM Hartwell, H Manners, MR Megowan, M Goni, M Palmer, J McManus. 2016. Data report: dissolved minor element compositions, sediment major and minor element concentrations, and reactive iron and manganese data from the Lesser Antilles volcanic arc region, IODP Expedition 340 Sites U1394, U1395, U1396, U1399, and U1400. In: Le Friant, A. Ishizuka, O, Stroncik, NA, and the Expedition 340 Scientists. Proceedings of the Integrated Ocean Drilling Program, V. 340. (November 2016)
  • Mitchell C, A Cunningham, D McKee. 2016. Derivation of the specific optical properties of suspended mineral particles and their contribution to the attenuation of solar irradiance in offshore waters by ocean color remote sensing. Journal of Geophysical Research: Oceans, V. 121, pp. 104-117. (January 2016)
  • NJ Hawco, DC Ohnemus, JA Resing, BS Twining, MA Saito. 2016. A dissolved cobalt plume in the oxygen minimum zone of the Eastern Tropical South Pacific. Biogeosciences Discussions, DOI: 10.5194/bg-2016-169. (May 2016)
  • Anderson RF, H Cheng, RL Edwards, MQ Fleisher, CT Hayes, K-F Huang, D Kadko, PJ Lam, WM Landing, Y Lao, YLu, CI Measures, SB Moran, PL Morton, DC Ohnemus, LF Robinson, RU Shelley. 2016. How well can we quantify dust deposition to the ocean ? Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. V. 374(2081) Article no.: 20150285. (November 2016)
  • A Noble, D Ohnemus, NJ Hawco, PJ Lam, MA Saito. Coastal sources, sinks and strong organic complexation of dissolved cobalt within the US North Atlantic GEOTRACES transect GA03. Biogeosciences Discussions, DOI: 10.5194/bg-2016- 512. (December 2016)
  • Hatta M, CI Measures, PJ Lam, D Ohnemus, M Auro, MM Grand, KE Selph. 2016. The relative roles of modified circumpolar deep water and benthic sources in supplying iron to the recurrent phytoplankton blooms above Pennell and Mawson Banks, Ross Sea, Antarctica. Journal of Marine Systems, DOI: 10.1016/j.jmarsys.2016.07.009. (June 2016)
  • Ohnemus DC, S Rauschenberg, W Krause, MA Brzezinski, JL Collier, S Geraci-Yee, SB Baines, BS Twining. 2016. Silicon content of individual cells of Synechococcus from the North Atlantic Ocean. Marine Chemistry, DOI: 10.1016/j.marchem.20l6.lO.003. (October 2016)
  • Baquiran JPM, GA Ramirez, AG Haddad, BM Toner, S Hulme, CG Wheat, KJ Edwards, BN Orcutt. 2016. Temperature and redox effect on mineral colonization in Juan de Fuca Ridge flank subsurface crustal fluids. Frontiers in Microbiology, V. 7, Article: 396. (March 2016)
  • Fruh-Green GL, BN Orcutt, S Green, C Cotterill, and the Expedition 357 Scientists. 2016. Expedition 357 Preliminary Report: Atlantic Massif Serpentinization and Life. International Ocean Discovery Program. DX.DOI.org/10.14379/iodp.pr.357.2016. (May 2016)
  • Zhang X, J Fang, W Bach, KJ Edwards, BN Orcutt, F Wang. 2016. Nitrogen stimulates the growth of subsurface basalt-associated microorganisms at the western flank of the Mid-Atlantic Ridge. Frontiers in Microbiology, V. 7, Article 633. (May 2016)
  • Edgcomb V, MG Pachiadaki, M Paraskevi, J Bernhard. 2016. Gene expression profiling of microbial activities and interactions in sediments under haloclines of E. Mediterranean deep hypersaline anoxic basins. The ISME Journal, DOI: 10.1038/ismej.2016.58. (April 2016)
  • Pachiadaki MG, V Redou, DJ Beaudoin, G Burgaud, VP Edgcomb. 2016. Fungal and projaryotic activities in the marine subsurface biosphere at Peru Margin and Canterbury Basin inferredfrom RNA-based analyses and microscopy. Frontiers in Microbiology, V. 7: Article 846. (June 2016)
  • Cetinic I, NJ Poulton, WH Slade. 2016. Characterizing the phytoplankton soup: pump and plumbing effects on the particle assemblage in underway optical seawater systems. Optics Express 20703, V. 24(18). (September 2016)
  • Kram SL, NN Price, EM Donham, MD Johnson, ELA Kelly, SL Hamilton, JE Smith. 2016. Variable responses of temperate calcified and fleshy macroalgae to elevated pCO2 and warming. ICES Journal of Marine Science, V. 74(3), pp. 693-703. (June 2016)
  • Ji R, Z Feng, BT Jones, C Thompson, C Chen, NR Record, JA Runge. Coastal amplification of supply and transport (CAST): a new hypothesis about the persistence of Calanus finmarchicus in the Gulf of Maine. ICES Journal of Marine Science (Accepted) (December 2016)
  • Record NR, D Talmy, S Vage. 2016. Quantifying tradeoffs for marine viruses. Frontiers in Marine Science V. 3, pp. 251. (December 2016)
  • Record NR, JD O’Brien, K Stamieszkin, RJ Runge. 2016. Omic-style statistical clustering reveals old and new patterns in the Gulf of Maine ecosystem. Canadian Journal of Fisheries and Aquatic Sciences, DOI: 10.1139/cjfas-2016-01521. (November 2016)
  • Friedland KD, NR Record, RG Asch, T Kristiansen, VS Saba, KF Drinkwater, S Henson, RT Leaf, RE Morse, DG Johns, SI Large, SS Hjollo, JA Nye, MA Alexander, R Ji. 2016. Seasonal phytoplankton blooms in the North Atlantic linked to the overwintering strategies of copepods. Elementa, DOI: 10.12952/journal.elementa.000099. (April 2016)
  • Pershing AJ, MA Alexander, CM Hernandez, LA Kerr, AL Mills, JA Nye, NR Record, HA Scannell, JD Scott, GD Sherwood, AC Thomas. 2016. Reponse to comments on "Slow Adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery" Science, V. 352 (6284), pp. 423. (April 2016)
  • Phillips BT, M Dunbabin, B Henning, C Howell, A DeCiccio, A Flinders, KAKelley, JJ Scott, S Albert, S Carey, R Tsadok, A Grinham. 2016. Exploring the "Sharkcano": biogeochemical observations of the Kavachi submarine volcano (solomon lslands). oceanography, V. 29(4), pp. 160-169. (December 2016)
  • Scott JJ, B Glazer, D Emerson. 2016. Bringing microbial diversity into focus: high-resolution analysis of iron mats from the Lo’ihi Seamount. Environmental Microbiology, DOI: 10.1111/1462-2920.13607 (November 2016)
  • Choi J, F Yang, R Stepanauskas, E Cardenas, A Garoutte, R Williams, J Flater, JM Tiedje, KS Hofmockel, B Gelder, A Howe. 2016. Strategies to improve reference databases for soil microbiomes. The ISME Journal, DOI: 10.1038/ismej.20l6.l68. (December 2016 )
  • Zhang Y, Sun Y, N Jiao, R Stepanauskas, H Luo. 2016. Ecological genomics of the uncultivated marine roseobacter lineage CHAB-I-5. Applied and Environmental Microbiology, V. 82(7), pp. 2100-2111. (April 2016)
  • Wasmund K, M Cooper, L Schreiber, KG Lloyd, BJ Baker, DG Petersen, BB Jorgensen, R Stepanauskas, R Reinhardt, A Schramm, A Loy, L Adrian. 2016. Single-cell genome and group-specific dsrAB sequencing implicate marine members of the Class Dehalococoidia (:Phylum Chloroflexi) in sulfur cycling. mBio, V. 7(3):e00266-16.(June 2016)
  • Dyksma S, K Bischof, BM Fuchs, K Hoffmann, D Meier, DAMeyerdierks, P Pjevac, D Probandt, M Richter R Stepanauskas R , M Musmann. 2016. Ubiquitous Gammaproteobacteria dominate dark carbon fixation in coastal sediments. ISME Journal, V. 10(8), pp. 1939-1953. (August 2016)
  • Eiler A, R Mondav, L Sinclair, L Fernandez-Vidal, DG Scofield, P Schwientek, M Martinez-Garcia, D Torrents, KD McMahon, SGE Andersson, R Stepanauskas, T Woyke, T Bertilsson. 2016. Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria. ISME Journal, V. 10(8), pp. 1902-1914. (August 2016)
  • Saito MA, A Noble, N Hawco, BS Twining, D Ohnemus, SG John, P Lam, TM Conway, R Johnson, DM Moran, M Mcilvin. 2016. The acceleration of dissolved cobalt’s ecological stoichiometry due to biological uptake, remineralization, and scavenging in the Atlantic Ocean. Biogeosciences Discussions, DOI: 10.5194/bg-2016- 511. (November 2016)
  • Baines SB, Chen X, Vogt S, Fisher NS, Twining BS, Landry MR. 2016. Microplankton trace element contents: implications for mineral limitation of mesozooplankton in an HNLC area. Journal of Plankton Research, V. 38(2), pp. 256-270. (January 2016)
  • Whitney LP, MW Lomas. 2016. Growth on ATP elicits a P-stress response in the picoeukarote Micromonas pusilla. PLoS One, V. 11(5), pp. 1-18. (May 2016)
  • Mccluskey K, A Alvarez, AR Bennett, D Bokati.......SW Yentsch. 2016. The US Culture Collection Network lays the foundation for progress in preservation of valuable microbial resources. Phytopathy, DOI: 10.1094/PHYTO-02-16-0074-RVW. (March 2016)

2015

  • Koolen HHF, RF Swarthout, RK Nelson, H Chen, LC Krajewski, C Aeppli, AM McKenna, RP Rodgers, CM Reddy. 2015. Unprecedented insights into the chemical complexity of coal tar from comprehensive two-dimensional gas chromatography mass spectrometry and direct infusion Fourier transform ion cyclotron resonance mass spectrometry. Energy & Fuels, V. 29(2), pp. 641-648. (January 2015)
  • Drozd GT, DR Worton, C Aeppli, CM Reddy, H Zhang, E Variano, AH Goldstein. 2015. Modeling comprehensive chemical composition of weathered oil following a marine spill to predict ozone and potential secondary aerosol formation and constrain transport pathways. Journal of Geophysical Research: Oceans. DOI: 10.1002/2015JC011093. (October 2015)
  • Andersson AJ, DI Kline, PJ Edmunds, SD Archer, N Bednarsek, RC Carpenter, M Chadsey, P Goldstein, AG Grottoli, TP Hurst, AL King, JE Kubler, IB Kuffner, KRM Mackey, BA Menge, A Patan, U Riebesell, A Schnetzer, ME Warner, RC Zimmerman. 2015. Understanding ocean acidification impacts on organismal to ecological scales. Oceanography, V. 28(2), pp. 16-27. (June 2015)
  • Finke N, SE Baer, JP Chanton, M Saxton, SB Joye. 2015. Methane production in sea ice. Geophysical Research Letters. (in review)
  • Baer SE, TL Connelly, DA Bronk. 2015. Nitrogen uptake dynamics in landfast sea ice of the Chukchi Sea. Polar Biology, V. 38, pp. 781-797. (January 2015)
  • Singh A, SE Baer, U Riebesell, AC Martiny, MW Lomas. 2015. C:N:P stoichiometry at the Bermuda Atlantic Time-series Study station in the North Atlantic Ocean. Biogeosciences, V. 12, pp. 6389-6403. (November 2015)
  • Rosengard SZ, PJ Lam, WM Balch, ME Auro, S Pike, D Drapeau, B Bowler. 2015. Carbon export and transfer to depth across the Southern Ocean Great Calcite Belt. Biogeosciences Discussions, V. 12(3), pp. 2843-2896. (January 2015)
  • Salisbury J, D Vandemark, B Jonsson, WM Balch, S Chakraborty, S Lohrenz, B Chapron, B Hales, A Mannino, JT Mathis, N Reul, SR Signorini, R Wanninkhof, KK Yates. 2015. How can present and future satellite missions  support scientific studies that address ocean acidification? Oceanography, V. 28(2), pp. 108-121. (June 2015)
  • Rivero-Calle S, A Gnanadesikan, CE Del Castillo, WM Balch, SD Guikema. 2015. Miltidecadal increase in North Atlantic coccolithophores and the potential role of rising CO2. Science, V.350 (6267), pp. 1533-1537. (November 2015)
  • Balch WM, T Huntington, G Aiken, K Butler. 2015. Towards a quantitative and empirical dissolved organic carbon budget for the Gulf of Maine, a semi-enclosed shelf sea. Global Biogeochemical Cycles. DOI: 10.1002/2015GB005332. (December 2015)
  • Becraft ED, JM Wood, DB Rusch, M Kuhl, SI Jensen, DA Bryant, DW Roberts, FM Cohan, DM Ward. 2015. The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of Mushroom Spring, Yellowstone Park. Frontiers in Microbiology, V. 6, Article 590. (June 2015)
  • Nowack S, MT Olsen, GA Schaible, ED Becraft, G Shen, I Klapper, DA Bryant, DM Ward. 2015. The molecular dimension of microbial species: 2. Synechococcus strains representative of putative ecotypes inhabiting different depths in the Mushroom Spring microbial mat exhibit different adaptive and acclimative responses to light. Frontiers in Microbiology, V. 6, Article 626. (June 2015)
  • Olsen MT, S Nowack, JM Wood, ED Becraft, K LaButti, A Lipsen, J Martin, WS Schackwitz, DB Rusch, FM Cohan, DA Bryant, DM Ward. 2015. The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat. Frontiers in Microbiology, V. 6, Article 604. (June 2015)
  • Young-Mo K. S Nowack, MT Olsen, ED Becraft, JM Wood, V Thiel, I Klapper, M Kuhl, JK Fredrickson, DA Bryant, DM Ward, TO Metz. 2015. Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms. Frontiers in Microbiology, V. 6, Article 209. (June 2015)
  • Melendrez MC, ED Becraft, JM Wood, MT Olsen, DA Bryant, JF Heidelberg, DB Rusch, FM Cohan, DM Ward. 2015. Recombination does not hinder formation or detection of ecological species of Synechococcus inhabiting a hot spring cyanobacterial mat. Frontiers in Microbiology, V. 6: Article 1540. (December 2015)
  • Hu, SK, Z Liu, AAAY, PD Countway, DY Kim, AC Jones. 2015. Estimating protistan diversity using high-throughput sequencing. Journal of Eukaryotic Microbiology, DOI: 10.1111/jeu.12217 (April 2015)
  • Emerson D & De Vet W. 2015. The role of FeOB in engineered water ecosystems: a review. Journal of the American Water Works Association. V. 107, pp.   (January 2015)
  • Barco RA, D Emerson, JB Sylvan, BN Orcutt, MEJ Meyers, GA Ramirez, JD Zhong, KJ Edwards. 2015. New insight into microbial iron oxidation as revealed by the proteomic profile of an obligate iron-oxidizing chemolithoautotroph. Applied and Environmental Microbiology, V. 81(17), pp. 5927-5937. (September 2015)
  • Kappler A, D Emerson, J Grainick, EM Muehe. 2015. "Geomicrobiology of Iron" In: Ehrlich's Geomicrobiology, 6th Edition (HL Erhlich, DK Newman, A Kappler, Editors), CRC Press, pp. 343-399. (October 2015)
  • Emerson D, J Scott, J Benes, W Bowden. 2015. Microbial iron oxidation in the Arctic tundra and the implications for biogeochemical cycling. Applied & Environmental Microbiology, V. 81(23), pp. 8066-8075. (December 2015)
  • Henri P, C Rommevaux-Jestin, F Lesongeur, A Mumford, D Emerson, A Godfroy, B Menez. 2015. Structural iron (II) of basaltic glass as an energy source for Zetaproteobacteria in an abyssal plain environment, off the Mid Atlantic Ridge. Frontiers in Microbiology, V. 6, Article 1518. (December 2015)
  • Cunningham C, JA Fernandez Robledo. 2015. Molluscan immunology. Fish & Shellfish Immunology. V. (June 2015)
  • Munson-McGee JH, E Field, M Bateson, C Rooney, R Stepanauskas, MJ YOung. 2015. Nanoarchaeota, its sulfolobales host, and Nanoarchaeota virus distribution across Yellowstone National Park hot springs. Applied and Environmental Microbiology, V.   pp.    (September 2015)
  • Durif CMF, DM Fields, HI Browman, SD Shema, JR Enoae, AB Skiftesvik, R Bjelland, R Sommaruga, MT Arts. 2015. UV radiation changes algal stoichiometry, but does not have cascading effects on a marine food chain. Journal of Plankton Research, V.  (October 2015)
  • Myers-Smith IH, SC Elmendorf, PSA Beck, M Wilmking, M Hallinger, D blok, KD Tape.........KC Guay. 2015. Climate sensitivity of shrub growth across the tundra biome. Nature Climate Change, DOI: 10.1038/nclimate2697. (July 2015)
  • Fanning, KA, RT Masserini, J Walsh, R Wanninkhof, K Sullivan, JI Virmani, CA Heil. 2015. An ammonium enrichment event in the surface ocean: wind forcing and potential ramifications. Marine Chemistry, V. 174, pp. 26-34. (March 2015)
  • Hopkins J, SA Henson, SC Painter, T Tyrrell, AJ Poulton. 2015. Phenological characteristics of global coccolithophore blooms. Global Biogeochemical Cycles, DOI: 10.1002/2014GB004919. (January 2015)
  • Jacquot JE, JW Moffett. 2015. Copper distribution and speciation across the internatioanl GEOTRACES section GA03. Deep-Sea Research II: Topical Studies in Oceanography, (in press)
  • Labonte JM, BK Swan, B Poulos, H Luo, S Koren, SJ Hallam, MB Sullivan, T Woyke, KE Wommack, R Stepanauskas. Single-cell genomics-based analysis of virus-host interactions in marine surface bacterioplankton. 2015. The ISME Journal, V. pp. 1-14. (February 2015)
  • Labonte JM, EK field, M Lau, D Chivian, E van Heerden, KE Wommack, TL Kieft, TC Onstott, R Stepanauskas. 2015. Single cell genomics indicates horizontal gene transfer and viral infections in a deep subsurface Firmicutes population. Frontiers in Microbiology, DOI: 10.3389/fmicb.2015.00349. (April 2015)
  • Labonte JM, SJ Hallam, CA Suttle. 2015. Previously unknown evolutionary groups dominate the ssDNA gokushoviruses in oxic and anoxic waters of a coastal marine environment. Frontiers in Microbiology, V. 6, article 315. (April 2015)
  • Gillett DJ, SB Weisberg, T Grayson, A Hamilton, V Hansen, EW Leppo, MC Pelletier, A Borja, D Cadien, D Dauer, R Diaz, M Dutch, JL Hyland, M Kellogg, PF Larsen, JS Levinton, R Llanso, LL Lovell, PA Montagna, D Pasko, CA Phillips, C Rakocinski, JA Ranasinghe, DM Sanger, H Teixeira, RF Van Dolah, RG Velarde, KI Welch. 2015. Effect of ecological group classification schemes on performance of the AMBI benthic index in US coastal waters. Ecological Indicators, V. 50, pp. 99-107. (March 2015)
  • Lee YJ, PA Matrai, MAM Friedrichs, VS Saba, D Antoine, M Ardyna, I Asanuma, M Babin, S Belanger. 2015. An assessment of phytoplankton primary productivity in the Arctic Ocean from satellite ocean color/in situ chlorophyll-a-based models. Journal of Geophysical Research: Oceans V.120(9), pp. 6508-6541. (September 2015)
  • Kretz CB, DW Bell, DA Lomas, MW Lomas, AC Martiny. 2015. Influence of growth rate on the physiological response of marine Synechococcus to phosphate limitation. Frontiers in Microbiology. DOI: 10.3389/fmicb 2015 00085. (February 2015)
  • Fawcett SE, BB Ward, MW Lomas, DM Sigman. 2015. Vertical decoupling of nitrate assimilation and nitrification in the Sargasso Sea. Deep-Sea Research Part I: Oceanographic Research Papers, V.103, pp. 64-72 (May 2015)
  • Mackinson BL, SB Moran, MW Lomas, GM Stewart, RP Kelly. 2015. Estimates of micro-,nano, and picoplankton contributions to particle export in the northeast Pacific. Biogeosciences, V. 12, pp. 3429-3446. (June 2015)
  • Estapa ML, DA Siegel, KO Buesseler, RHR Stanley, MW Lomas, NB Nelson. 2016. Decoupling of net community and export production on submesoscales in the Sargasso Sea. Global Biogeochemical Cycles, V. 29, pp. 1266-1282. (July 2015)
  • Campbell RG, CJ Ashjian, EB Shen, BF Sherr, , MW Lomas, C Ross, P Alatalo, C Gelfman, D Van Keuren. 2015. Mesozooplankton grazing during spring sea-ice conditions in the eastern Bering Sea. Deep Sea Research Pt.II: Topical Studies in Oceanography. DOI: 10.1016/j.dsr2.2015.11.003. (November 2015)
  • Martinez Martinez J, A Boere, I Gilg, JWM van Lent, HJ Witte, JDL van Bleijswijk, CPD Brussard. 2015. New lipid envelope-containing dsDNA virus isolates infecting Micromonas pusilla reveal a separate phylogenetic group. Aquatic Microbial Ecology, V. 74, pp. 17-28. (January 2015)
  • Marquis ND, NR Record, JA Fernandez Robledo. 2015. Survey for protozoan parasites in Eastern oysters (Crassostrea virginica) from the Gulf of Maine using PCR-based assays. Parasitology International, V. 64, pp. 299-302. (April 2015)
  • Tremblay JE, LG Anderson, P Matrai, P Coupel, S Belanger, C Michel, M Reigstad. 2015. Global and regional drivers of nutrient supply, primary production and CO2 drawdown in the changing Arctic Ocean. Progress in Oceanography, V. 139, pp. 171-196. (September 2015)
  • Mitchell C, A Cunningham, D McKee. 2015. Derivation of the specific optical properties of suspended mineral particles and their contribution to the attenuation of solar irradiance in offshore waters by ocean color remote sensing. Journal of Geophysical Research: Oceans. V. pp. (November 2015)
  • Hayes CT, RF Anderson, MQ Fleisher, SM Vivancos, PJ Lam, DC Ohnemus, KF Huang, LF Robinson, Y Lu, H Cheng, RL Edwards, SB Moran. 2015. Intensity of Th and Pa scavenging partitioned by particle chemistry in the North Atlantic Ocean. Marine Chemistry, DOI: 10.1016/j.marchem.2015.01.006. (February 2015)
  • Ohnemus DC, PJ Lam. 2015. Cycling of lithogenic marine particles in the US GEOTRACES North Atlantic transect. Deep-Sea Research II: Topical Studies in Oceanography, V. 116, pp. 283-302. (June 2015)
  • Revels BN, DC Ohnemus, PJ Lam, TM Conway, SG John. 2015. The isotopic signature and distribution of particulate iron in the North Atlantic Ocean. Deep-Sea Research II, V.116, pp. 321-331. (June 2015)
  • Lam PJ, DC Ohnemus, ME Auro. 2015. Size-fractionated major particle composition and concentrations from the US Geotraces North Atlantic Zonal Transect. Deep-Sea Research Pt. II: Topical Studies in Oceanography, V. 116, pp. 303-320. (June 2015)
  • Noble AE, Y Echegoyen-Sanz, EA Boyle, DC Ohnemus, PJ Lam, R Kayser, M Reuer, J Wu, W Smethie. 2015. Dynamic variability of dissolved Pb and Pb isotope composition from the U.S. North Atlantic GEOTRACES transect. Deep-Sea Research II: Topical Studies in Oceanography, V. 116, pp. 208-225. (June 2015)
  • Orcutt BN. 2015. Biological oceanography: life in the deepest depths. Nature Geoscience/News and Views. Doi: 10.1038/NGEO2378. (March 2015)
  • Carr SA, BN Orcutt, KW Mandernack, JR Spear. 2015. Abundant atribacteria in deep marine sediment from the Adelie Basin, Antarctica. Frontiers in Microbiology, DOI: 10.3389/fmicfb.2015.00872. (August 2015)
  • Orcutt BN, JB Sylvan, DR Rogers, J Delaney, RW Lee, PR Girguis. 2015. Carbon fixation by basalt-hosted microbial communities. Frontiers in Microbiology, V. 6 Article 904. (September 2015)
  • Lee MD, Walworth NG, Sylvan JB, Edwards KJ, Orcutt BN. 2015. Microbial communities on seafloor basalts at Dorado Outcrop reflect level of alteration and highlight global lithic clades. Frontiers in Microbiology, V. 6 Article 1470. (December 2015)
  • Kormas KA, MG Pachiadaki, H Karayanni, ER Leadbetter, JM Bernhard, VP Edgecomb. 2015. Inter-comparison of the potentially active prokaryotic communities in the halocline sediments of Mediterranean deep-sea hypersaline basins. Extremophiles, DOI: 10.1007/s00792-015-0770-1. (July 2015)
  • Panek T, P Taborsky, MG Pachiadaki, M Hroudova, C Vicek, VP Edgcomb, I Cepicka. 2015. Combined culture-based and culture-independent approaches provide insights into diversity of Jakobids, an extremely plesiomorphic eukaryotic lineage. Frontiers in Microbiology, V. 6 Article 1288. (November 2015)
  • Bernhard J, CR Morrison, E Pape, DJ Beaudoin, MA Todaro, M Pachiadaki, K Kormas, V Edgcomb. 2015. Metazoans of redoxcline sediments in Mediterranean deep-sea hypersaline anoxic basins. BMC Biology, V. 13(1), pp. 105-125. (November 2015)
  • Cetinic I, MJ Perry, E D'Asaro, NT Briggs, N Poulton, M Sieracki. 2015. A simple optical index shows spatial and temporal heterogeneity in phytoplankton community composition during the 2008 North Atlantic Bloom Experiment. Biogeosciences, V. 12(7), pp. 2179-2194. (April 2015)
  • Kopf A, Bicak M, Kottmann R, Schnetzer J, ........N Poulton, S Jones, R Collin, JA Fuhrmann.........2015. The ocean sampling day consortium. GigaScience, V. 4, pp. 27 (July 2015)
  • Edmunds PJ, R Albright, RC Carpenter, A Chuie, T-Y Fan, S Harii, H Kitano, H Kurihara, L Legendre, S Mitarai, S Muko, Y Nozawa, J Padilla-Gamino, NN Price, K Salai, R Steneck, G Suzuki, M van Oppen, A Yarid, NL Satol, RD Gates. 2015. Geographic variation in long-term trajectories of change in coral recruitment: a global-to-l9ocal perspective. Marine & Freshwater Research DOI: 10.1071/MF14139 (February 2015)
  • Alin SR, RE Brainard, NN Price, JA Newton, A Cohen, WT Petersen, EH DeCarlo, EH Shadwick, S Noakes, N Bednarsek. 2015. Characterizing the natural system: toward sustained, integrated coastal ocean acidification observing networks to facilitate resource management and decision support. Oceanography, V. 28(2), pp. 92-107. (June)
  • Rauschenberg S, BS Twining. 2015. Evaluation of approaches to estimate biogenic particulate trace metals in the ocean. Marine Chemistry, DOI: 10.1016/j.marchem.2015.01.004. (January 2015)
  • Pershing AJ, KE Mills, NR Record, K Stamieszkin, KV Wurtzell, CJ Byron, D Fitzpatrick, WJ Golet, E Koob. 2015. Evaluating trophic cascades as drivers of regime shifts in different ocean ecosystems. Philosophical Transactions of the Royal Society B: Biological Sciences. V. 370 (1659), pp. 1-9. (January 2015)
  • Stamieszkin K, AJ Pershing, NR Record, CH Pilskaln, HG Dam, LR Feinberg. 2015. Size as the master trait in modeled copepod fecal pellet carbon flux. Limnology & Oceanography, DOI: 10.1002/lno.10156. (January 2015)
  • Golet W, NR Record, S Lehuta, M Lutcavage, B Galuardi, AB Cooper, AJ Pershing. 2015. The paradox of the pelagics: why bluefin tuna can go hungry in a sea of plenty. Marine Ecology Progress Series. V.527, pp. 181-192. (January 2015)
  • Pershing AJ, MA Alexander, CM Hernandez, LA Kerr, A Le Bris, KE Mills, JA Nye, NR Record, HA Scannell, JD Scott, GD Sherwood, AC Thomas. 2015. Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery. ScienceXpress, DOI: 10.1126/science.aac9819. (October 2015)
  • Scott JJ, JA Breier, GW Luther III, D Emerson. 2015. Microbial iron mats at the Mid-Atlantic Ridge and evidence that zetaproteobacteria may be restricted to iron-oxidizing marine systems. PLoSONE, DOI: 10.1371/journal.pone.o119284. (March 2015)
  • Grubbs KJ, JJ Scott, KJ Budsberg, H Read, TC Balser, CR Currie. 2015. Unique honey bee (Apis mellifera) hive component-based communities as detected by a hybrid of phospholipid fatty-acid and fatty-acid methyl ester analyses. PLoS ONE, V. 10(4) Article e0121697. (April 2015)
  • Sanders JG, AC Beichman, J Roman, JJ Scott, D Emerson, JJ McCarthy, PR Girguis. 2015. Baleen whales host a unique gut microbiome with similarities to both carnivores and herbivores. Nature Communications, DOI: 10.1038/ncomms9285. (September 2015)
  • Stepanauskas R. 2015. Redefining microbial diversity from its single-celled building blocks. Environmental Microbiology Reports. V. 7(1), pp. 36-37. (February 2015)
  • Youssef NH, C Rinke, R Stepanauskas, I Farag, T Woyke, MS Elshahed. 2015. Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum "Diapherotrites". The ISME Journal, V. 9(2), pp. 447-460. (August 2015)
  • Field EK, A Scyrba, AE Lyman, CC Harris, T Woyke, R Stepanauskas, D Emerson. 2015. Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount. ISME Journal, V. 9, pp. 857-870. (March 2015)
  • Martijn J, F Schultz, K Zaremba-Niedzwiedzka, J Viklund, R Stepanauskas, SGE Andersson. 2015. Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution. The ISME Journal, DOI: 10.1038/ismej.2015.46. (April 2015)
  • Stepanauskas R. 2015. Wiretapping into microbial interactions by single cell genomics. Frontiers in Microbiology, V. 6, Article 258. (April 2015)
  • Ngugi DK, J Blom, R Stepanauskas, U Stingl. 2015. Diversification and niche adaptations of Nitrospina-like bacteria in the polyextreme interfaces of Red Sea brines. The ISME Journal, V. pp. 1-17. (December 2015)
  • Eiler, A, R Mondav, L Sinclair, L Fernandez-Vidal, DG Scofield, P Schwientek, M Martinez-Garcia, D Torrents, KD McMahon, SGE Andersson, R Stepanauskas, T Woyke, S Bertilsson. 2015. Tuning fresh: radiation through reqiring of central metabolism in streamlined bacteria. The ISME Journal, V. pp. (December 2015)
  • Lam PJ, BS Twining, C Jeandel, A Roychoudhury, J Resing, PH Santschi. 2015. Methods for analyzing the concentration and speciation of major and trace elements in marine particles. Progress in Oceanography, V. 133, pp. 32-42. (January 2015)
  • Pizeta, I, S Sander, R Hudson, D Omanovic, O Baars, K Barneau, K Buck, R Bundy, G Carrasco, P Croot, C Garnier L Gerringa, M Gledhill, K Hirose, Y Kondo, L Laglera, J Nuester, M Rijkenberg, S Takeda, BS Twining, M Wells. 2015. Interpretation of complexometric titration data: an intercomparison of methods for estimating models of trace metal complexation by natural organic ligands. Marine Chemistry, V. 173, pp. 3-24 (March 2015)
  • Mawji E, Schlitzer R, EM Dodas C Abadie, W Abouchami, RF Anderson, O Baars, K Bakker......BS Twining...2015. The GEOTRACES intermediate data product 2014. Marine Chemistry, V. (April 2015)
  • Twining BS, S Rauschenberg, PL Morton, DC Ohnemus, PJ Lam. 2015. Comparison of particulate trace element concentrations in the North Atlantic Ocean as determined with discrete bottle sampling and in situ pumping. Deep-Sea Research Pt. II: Topical Studies in Oceanography, V. 116, pp. 273-282. (June 2015)
  • Boyd, PW, RF Strzepek, MJ Ellwood, DA Hutchins, SD Nodder, BS Twining, SW Wilhelm. 2015. Why are biotic iron pools uniform across high-and low-iron pelagic ecosystems? Global Biogeochemical Cycles, V. 29 (7), DOI: 10.1002/2014GB005014. (June 2015)
  • Baines SB, Chen X, BS Twining, MR Landry. 2015. Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research, DOI: 10.1093/plankt/fbv098. (December 2015)
  • Twining BS, S Rauschenberg, P Morton, S Vogt. 2015. Metal contents of phytoplankton and labile particulate material in the North Atlantic Ocean. Progress in Oceanography, V. 137, pp. 261-283. (June 2015)
  • Gledhill, DK, MM White, J Salisbury, H Thomas, I Misna, M Leibman, B Mook, J Grear, AC Candelmo, RC Chambers, CJ Gobler, CW Hunt, AL King, NN Price, SR Signorini, E Stancioff, C Stymiest, RA Wahle, JD Waller, ND Rebuck, ZA Wang, TL Capson, JR Morrison, SR Cooley, SC Doney. 2015. Ocean and coastal acidification off New England and Nova Scotia. Oceanography, V. 28(2), pp. 182-197. (June 2015)
  • Chappell PD, LP Whitney, JR Wallace, AI Darer, S Jean-Charles, BD Jenkins. 2015. Genetic indicators of iron limitation in wild populations of Thalassiosira oceanica from the northeast Pacific Ocean. ISME Journal, V. 9(3), pp. 592-602. (March 2015)

2014

  • Radovic JR, C Aeppli, RK Nelson, N Jimenez, CM Reddy, JM Bayona, J Albaiges. 2014. Assessment of photochemical processes in marine oil spill fingerprinting. Marine Pollution Bulletin, V. 79 (1-2), pp. 268-277. (February 2014)
  • Aeppli C, RK Nelson, JR Radovic, CA Carmichael, DL Valentine, CM Reddy. 2014. Recalcitrance and degradation of petroleum biomarkers upon abiotic and biotic natural weathering of Deepwater Horizon oil. Environmental Science & Technology, V. 48, pp. 6726-6734. (June 2014)
  • Gros J, CM Reddy, C Aeppli, RK Nelson, CA Carmichael, JS Arey. 2014. Resolving biodegradation patterns of persistent saturated hydrocarbons in weathered oil samples from the Deepwater Horizon disaster. Environmental Science & Technology. V. 48, pp. 1628-1637. (February 2014)
  • Ruddy BM, M Huettel, JE Kostka, VV Lobodin, BJ Bythell, AM McKenna, C Aeppli, CM Reddy, RK Nelson, AG Marshall, RP Rodgers. 2014. Targeted petroleomics: analytical investigation of Macondo Well oil products from Pensacola Beach. Energy & Fuels, V. 28(6), pp. 4043-4050. (May 2014)
  • Hopkins FE, SD Archer. 2014. Consistent increase in dimethyl sulphide (DMS) in response to high CO2 in five shipboard bioassays from contrasting NW European waters. Biogeosciences Discussions. V. 11(2), pp. 2267-2303. (February 2014)
  • Archer SD, IR McDonald, CW Herbold, SC Cary. 2014. Characterisation of bacterioplankton communities in the meltwater ponds of Bratina Island, Victoria Land, Antarctica. FEMS Microbiology Ecology. V. 89, pp. 451-464. (June 2014)
  • Connelly TL, SE Baer, JT Cooper, DA Bronk, B Wawrik. 2014. Urea uptake and carbon fixation by marine pelagic bacteria and archaea during the Arctic summer and winter seasons. Applied and Environmental Microbiology, V. 80, pp. 6013-6022. (July 2014)
  • Baer SE, TL Connelly, RE Sipler, PL Yager, DA Bronk. 2014. Effect of temperature on rates of ammonium uptake and nitrification in the western coastal Arctic during winter, spring, and summer. Global Biogeochemical Cycles, V. 28(12), pp. 1455-1466. (December 2014)
  • Balch WM, DT Drapeau, BC Bowler, ER Lyczkowski, LC Lubelczyk, SC Painter, AJ Poulton. 2014. Surface biological, chemical, and optical properties of the Patagonian Shelf coccolithophore bloom, the brightest waters of the Great Calcite Belt. Limnology & Oceanography, V. 59, pp. 1715-1732. (September 2014)
  • Muller-Karger FE, MT Kavanaugh, E Montes, WM Balch, M Breitbart, FP Chavez, SC Doney, EM Johns, RM Letelier, MW Lomas, HM Sosik, AE White. 2014. A framework for a marine biodiversity observing network within changing continental shelf seascapes. Oceanography, V. 27, pp. 18-23. (June 2014)
  • Balch WM, BC Bowler, LC Lubelczyk, MW Stevens, Jr. 2014. Aerial extent, composition, bio-optics and biogeochemistry of a massive under-ice algal bloom in the Arctic. Deep-Sea Research II: Topical Studies in Oceanography, V. 105, pp. 42-58. (July 2014)
  • Arrigo KR, DK Perovich, RS Pickart, ZW Brown, GL van Kijken, KE Lowry, MM Mills, MA Palmer, WM Balch, NR Bates, CR Benitez-Nelson, E Brownlee, KE Frey, SR Laney, J Mathis, A Matsuoka, BG Mitchell, GWK Moore, RA Reynolds, HM Sosik, JH Swift. 2014. Phytoplankton blooms beneath the sea ice in the Chukchi Sea. Deep Sea Research Pt. II: Topical Studies in Oceanography, V. 105, pp. 1-16. (July 2014)
  • Valiadi M, SC Painter, JT Allen, WM Balch, MD Iglesias-Rodriguez. 2014. Molecular detection of bioluminescent dinoflagellates in surface waters of the patagonian shelf during early austral summer 2008. PLoS ONE, V. 9(6), e98849. (June 2014)
  • Kim DY, PDCountway , AC Jones, A Schnetzer, W Yamashita, C Tung, DA Caron. 2014. Monthly to interannual variability of microbial eukaryote assemblages at four depths in the eastern North Pacific. The ISME Journal, V. 8 (3), pp. 515-530. (March 2014)
  • Alle A, Y Lie, Z Liu, SK Hu, AC Jones, DY Kim, PD Countway, LA Amaral-Zettler, SC Cary, EB Sherr. 2014. Investigating microbial eukaryotic diversity from a global census: insights from a comparison of pyrotag and full-length sequences of 18S rRNA gene sequences. Applied and Environmental Microbiology, doi: 10.1128/AEM.00057-14. (May 2014)
  • Fernandez-Robledo, JA, GR Vasta, NR Record. 2014. Protozoan parasites of bivalve molluscs: literature follows culture. PLoS ONE, V. 9(6), e100872. (June 2014)
  • Shridhar S, K Hassan, DJ Sullivan, GR Vasta, JA Fernandez-Robledo. 2014. Herbicides and anti-microbials that target plastic-associated enzymes inhibit the proliferation of the protozoan parasite Perkinsus marinus. International Journal for Parasitology: Drug and Drug Resistance.
  • Wijayalath W, S Majji, Y Kleschenko, L Pow-Sang, TD Brumeanu, EF Villasante, GR Vasta, JA Fernandez-Robledo, S Casares. 2014. Humanized HLA-DR4 mice fed with the protozoan pathogen of oysters Perkinsus Marinus (dermo) do not develop noticeable pathology but elicit systemic immunity. PLosOne. V. 9, (1), e87435. (January 2014)
  • Fields DM, JA Runge, C Thompson, SD Shema, RM Bjelland, CMF Durif, AB Skiftesvik. 2014. Infection of the planktonic copepod Calanus finmarchicus by the parasitic dinoflagellate Blastodinium spp: effects on grazing, respiration, fecundity and fecal pellet production. Journal of Plankton Research, DOI: 10.1093/plankt/fbu084. (October 2014)
  • Fleming EJ, I Cetinic, CS Chan, DW King, D Emerson. 2014. Ecological succession among fe-oxidizing bacteria. The ISME Journal, V. 8, pp. 806-815. (April 2014)
  • Goes JI, Gomes, HdR, EM Haugen, KT McKee, EJ D’Sa, AM Chekalyuk, DK Stoecker, PJ Stabino, SI Saitoh, RN Sambrotto. 2014. Fluorescence, pigment and microscopic characterization of Bering Sea phytoplankton community structure and photosynthetic competence in the presence of a cold pool during summer. Deep-Sea Research Pt. II: Topical Studies in Oceanography, DOI: 10.1016/j.dsr2.2013.12.004.
  • Heil CA, DA Bronk, MR Mulholland, JM O'Neil, PW Bernhardt, S Muraski, JA Havens, GA Vargo. 2014. Influence of daylight surface aggregation behavior on nutrient cycling during a Karenia brevis (Davis) G. Hansen & Moestrup bloom: migration to the surface as a nutrient acquisition strategy. Harmful Algae, DOI: 10.1016/j.hal.2014.06.001. (June 2014)
  • Heil CA, LK Dixon, E Hall, M Garrett, JM Lenes, JM O'Neil, BM Walsh, DA Bronk, L Killberg-Thoreson, GL Hitchcock, KA Meyer, MR Mulholland, L Procise, GJ Kirkpatrick, JJ Walsh, RW Weisberg. Blooms of Karenia brevis (David) G. Hansen & Moestrup on the West Florida Shelf: nutrient sources and potential management strategies based on a multi-year regional study. Harmful Algae, V. 38, pp. 127-140. (September 2014)
  • Meyer KA, JM O'Neil, GL Hitchcock, CA Heil. 2014. Microbial production along the West Florida Shelf: responses of bacteria and viruses to the presence and phase of Karenia brevis blooms. Harmful Algae, DOI: 10.1016/j.hal.2014.04.015. (June 2014)
  • Killberg-Thoreson L, MR Mulholland, CA Heil, MP Sanderson, JM O’Neil, DA Bronk. 2014. Nitrogen uptake kinetics in field populations and cultured strains of Karenia brevis. Harmful Algae, DOI: 10.1016/j.hal.2014.04.008. (May 2014)
  • Mulholland MR, PW Bernhardt, I Ozmon, LA Procise, M Garrett, J O’Neil, CA Heil, DA Bronk. 2014. Contributions of diazotrophy to nitrogen inputs supporting Karenia brevis blooms in the Gulf of Mexico. Harmful Algae, V. 38, pp. 20-29. (May 2014)
  •  Heil CA, DA Bronk, LK Dixon, G Hitchcock, G Kirkpatrick, MR Mulholland, J O’Neil, J Walsh, R Weisberg, M Garrett. 2014. The Gulf of Mexico EOHAB: Karenia Program 2006-2012. Harmful Algae, V. 38, pp. 3-7. (September 2014)
  • Bronk DA, L Lillberg-Thoreson, RE Sipler, MR Mulholloand, QN Roberts, PW Bernhardt, M Garrett, JM O'Neil, CA Heil. 2014. Nitrogen uptake and regeneration (ammonium regeneration, nitrification and photoproduction) in waters of the West Florida Shelf prone to blooms of Karenia brevis. Harmful Algae, DOI: 10.1016/j.hal.2014.04.007. (May 2014)
  • Bronk DA, L Killberg=Thoreson, RE Sipler, QN Roberts, MR Mulholland, P Bernhardt, M Garrett, CA Heil. 2014. Nitrogen uptake and regeneration(ammonium regeneration, nitrification and photoproduction) in waters of the West Florida Shelf prone to blooms of Karenia brevis. Harmful Algae, V. 38, pp. 50-62. (September 2014)
  • Killberg-Thoreson L, RE Sipler, CA Heil, MJ Garrett, QR Roberts, DA Bronk. 2014. Nutrients release from decaying fish support microbial growth in the eastern Gulf of Mexico. Harmful Algae. V. 38, pp. 40-49. (May 2014)
  • Jacquot JE, REA Horak, SA Amin, AH Devol, AE Ingalls, EV Armbrust, DA Stahl, JW Moffett. 2014. Assessment of the potential for copper limitation of ammonia oxidation by ARchaea in a dynamic estuary. Marine Chemistry, V. 162, pp. 37-49. (May 2014)
  • Jacquot JE, JW Moffett. 2014. Copper distribution and speciation across the international GEOTRACES Section GA03. Deep-Sea Research Part II: Topical Studies in Oceanography, DOI: 10.1016/j.der2.2014.11.013. (November 2014)
  • Testa JM, Y Li, YJ Lee, M Li, DC Brady, DM Di Toro, WM Kemp, JJ Fitzpatrick. 2014. Quantifying the effects of nutrient loading on dissolved O2 cycling and hypoxia in Chesapeake Bay using a coupled hydrodynamic-biogeochemical model. Journal of Marine Systems, V. 139, pp. 139-158. (June 2014)
  • Lomas MS, JA Bonachela, SA Levin, AC Martiny. 2014. Impact of ocean phytoplankton diversity on phosphate uptake. Proceedings of the National Academy of Sciences. DOI: 10.1073/pnas.1420760111. (November 2014)
  • Fawcett SE, MW Lomas, BB Ward, DM Sigman. 2014. The counterintuitive effect of summer-to-fall mixed layer deepening on eukaryotic new production in the Sargasso Sea. Global Biogeochemical Cycles, V. 28(2), pp. 86-102. (February 2014)
  • Batmalle CS, HI Chiang, K Zhang, MW Lomas, AC Martiny. 2014. Development and bias assessment of a method for targeted metagenomic sequencing of marine cyanobacteria. Applied and Environmental Microbiology. V. 80(3), pp. 1116-1125. (February 2014)
  • Martin P, ST Dyhrman, MW Lomas, N Poulton, BAS Van Mooy. 2014. Accumulation and enhanced cycling of polyphosphate by Sargasso Sea plankton in response to low phosphorus. Proceedings of the National Academy of Sciences, V. 111(22), pp. 8089-8094. (June 2014)
  • Choi HY, GM Stewart, MW Lomas, RP Kelly SB Moran. 2014. Linking the distribution of 210 Po and 210Pb with plankton community along Line P, Northeast Subarctic Pacific. Journal of Environmental Radioactivity. DOI: 10.1016/j.jenvrad.2014.02.009 (March 2014)
  • Cross JN, JT Mathis, MW Lomas, SB Moran, MS Baumann, D Shull, CW Mordy, NR Bates, R Gradinger, PJ Stabeno. 2014. Integrated assessment of the carbon budget in the Southeastern Bering Sea. Deep Sea Research II:Topical Studies in Oceanography, V. 109, pp. 112-124. (November 2014)
  • Treibergs LA, SE Fawcett, MW Lomas, DM Sigman. 2014. Nitrogen isotopic response of prokaryotic and eukaryotic phytoplankton to nitrate availability in Sargasso Sea surface waters. Limnology and Oceanography. V. 59, pp. 972-985. (May 2014)
  • Wallhead PJ, VC Garcon, JR Casey, MW Lomas. 2014. Long-term variability of phytoplankton carbonbiomass in the Sargasso Sea. Global Biogeochemical Cycles, DOI: 10.1002/2013GB004797. (July 2014)
  • Zimmerman AE, AC Martiny, MW Lomas, SD Allison. 2014. Variations in phosphorus pools, RNA allocation and C:P stoichiometry along a nutrient supply gradient in the North Atlantic subtropical gyre. Biogeosciences. V. 11, pp. 1599-1611. (March 2014)
  • Teng,Y-C, FW Primeau, JK Moore, MW Lomas, AC Martiny. 2014. Global-scale variations of the ratios of carbon to phosphorus in exported marine organic matter. Nature Geoscience, V.7, pp. 895-898. (November 2014)
  • Martinez Martinez J, BK Swan, WH Wilson. 2014. Marine viruses, a genetic reservoir revealed by targeted viromics. ISME Journal, V. 8, pp. 1079-1988. (May 2014)
  • Pagarete A, K Kusonnmano, K Petersen, S Kimmance, J Martinez Martinez, WH Wilson, JH Hehemann, MJ Allen, RA Sandaa. 2014. Dip in the gene pool: metagenomic survey of natural coccolithovirus communities. Virology, V. 466-467, pp. 129-137. (October 2014)
  • Kimmance SA, MJ Allen, A Pagarete, J Martinez Martinez, WH Wilson. 2014. Reduction of photosystem II during a virus controlled Emiliana Huxleyi bloom. Marine Ecology Progress Series. V. 495(9), pp. 65-76. (January 2014)
  • Gabric A, B Qu, PA Matrai. 2014. Investigating the coupling between phytoplankton biomass, aerosol optical depth and sea-ice cover in the Greenland Sea. Dynamics of Atmospheres and Oceans. V. 66, pp. 94-109. (June 2014)
  • Tjernstrom M, C Leck, CE Birch, JW Bottenheim BJ Brooks, IM Brooks, L Backlin, RY-W Chang, E Granath, M Graus, A Hansel, J Heintzenberg, A Held, A Hind S de la Rosa, P Johnston, J Knulst, G de Leuuw, L di Liberto, M Martin, PA Matrai, T Mauritsen, M Muller, SJ Norris, MV Orellana, DA Orsini, J Paatero, POG Persson, G Qiuju, C Rauschenberg, Z Ristovski, J Sedlar, MD Shupe, B Sireau, A Sirevaag, S Sjogren, O Stetzer, E Swietlicki, M Szczodrak, P Vaattovaara, N Wahlberg, M Westberg, CR Wheeler. 2014. The Arctic Summer Cloud-Ocean Study (ASCOS): overview and experimental design. Atmospheric Chemistry and Physics, Arctic Summer Cloud Ocean Study (ASCOS), (ACP/OS/AMT Inter-Journal SI), Atmospheric Chemistry and Physics. V. 14, pp. 2823-2869. (March 2014)
  • Halfacre JW, TN Knepp, PB Shepson, CR Stephens, KA Pratt, B Li, PK Peterson, SJ Walsh, WR Simpson, PA Matrai, JW Bottenheim, S Netcheva, DK Perovich, A Richter. 2014. Temporal and spatial characteristics of ozone depletion events from measurements in the Arctic. Atmospheric Chemistry and Physics, V. 14, pp. 4875-4894. (May 2014)
  • Mumford AC, JL Barringer, PA Reilly, DD Eberl, AE Blum, LY Young. 2014. Biogeochemical environments of streambed-sediment pore waters with and without arsenic enrichment in a sedimentary rock terrain, New Jersey Piedmont, USA. Science of the Total Environment, DOI: 10.1016/j.scitotenv.2014.07.104. (August 2014)
  • Barringer JL, PA Reilly, DD Eberl, AC Mumford, WM Benzel, Z Szabo. 2014. Arsenic in New Jersey coastal plain streams, sediments, and shallow groundwater: effects from different geologic sources and anthropogenic inputs on biogeochemical and physical mobilization processes. USGS Professional Paper; Scientific Investigations Report 2013-5107. (January 2014)
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  • Field EK, Sczyrba A, Lyman AE, Harris CC, Woyke T, Stepanauskas R, Emerson D. 2014. Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount. The ISME Journal, V 9, pp. 857-870. (October 2014)
  • Engel P, R Stepanauskas, NA Moran. 2014. Hidden diversity in honey bee gut symbionts detected by single-cell genomics. PLOS Genetics, DOI: 10.1371/journal.pgen.1004596. (September 2014)
  • Kashtan N, SE Roggensack, S Rodrigue, JW Thompson, SJ Biller, A Coe, H Ding, P Marttinen, R Malmstrom, R Stocker, MJ Follows, R Stepanauskas, SW Chisholm. 2014. Single cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus. Science. V. 344 (6182), pp. 416-420. (April 2014)
  • Wasmund KL, KG Schrieber, DG Lloyd, A Petersen, R Schramm, R Stepanauskas, BB Jorgensen, L Adrian. 2014. Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi. The ISME Journal, V. 8(2), pp. 383-397. (February 2014)
  • Wilkins MJ, DW Kennedy, CS Castelle, EK Field, R Stepanauskas, JK Fredrickson, AE Konopka. 2014. Single-cell genomics reveals metabolic strategies for microbial growth and survival in an oligotrophic aquifer. Microbiology, V. 160 (Pt.2) pp. 362-372. (February 2014)
  • Youssef NH, C Rinke, R Stepanauskas, I Farag, T Woyke, MS Elshahed. 2014. Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum "Diapherotrites. The ISME Journal, V. 9, pp. 447-460. (August 2014)
  • Roux S, AK Hawley, MT Beltran, M Scofield, P Schwientek, R Stepanauskas. 2014. Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics. eLife Sciences, DOI: 10.7554/eLife.03125. (August 2015)
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  • Luo H, BK Swan, R Stepanauskas, AL Hughes, MA Moran. 2014. Evolutionary analysis of a streamlined lineage of surface ocean Roseobacters. The ISME Journal, V. 8(7), pp. 1428-1439. (July 2014)
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  • Twining BS, SD Nodder, AL King, DA Hutchins, GR LeCleir, JM DeBruyn, EW Maas, S Vogt, SW Wilhelm and PW Boyd. 2014. Differential remineralization of major and trace elements in sinking diatoms. Limnology and Oceanography. V. 59(3), pp. 689-704. (May 2014)
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2013

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  • Zarenba-Niedzwiedska, K, J Viklund, W Zhao, J Ast, A Sczyrba, T Woyke, KD McMahan, R Stepanauskas, SGE Andersson. 2013. Single cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade. Genome Biology. V. 14 (11): R130. (November 2013)
  • Nurk, S, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, AD Prjibelski, A Pyshkin, AA Sirotkin, Y Sirotkin, R Stepanauskas, SR Clingenpeel, T Woyke, JS Mclean, R Lasken, G Tesler, MA Alekseyev, PA Pevzner. 2013. Assembling singe-cell genomes and mini-metagenomes from chimeric MDA products. Lecture Notes in Computer Science. V. 7821, LNBI, pp. 158-170. (October 2013)
  • Garrity GM, J Banfield, J Eisen, N van der Lelis, T McMahon, D Rusch, E Delong, MA Moran, C Currie, J Furhman, S Hallam, P Hugenholtz, N Moran, K Nelson, R Roberts, R Stepanauskas. 2013. Prokaryotic super program advisory committee DOE Joint Genome Institute, Walnut Creek, CA, Masrch 27, 2012. Standards in Genomic Sciences. V. 8(3). (July 2013)
  • Eiler, A, K Zaremba-Niedzwiedzka, M Martinez-Garcia, KD McMahon, R Stepanauskas, SGE Andersson, S Bertilsson. 2013. Productivity and salinity structuring of the microplankton revealed by comparative freshwater metagenomics. Environmental Microbiology. DOI: 10.1111/1462-2920.12301. (September 2013)
  • Lloyd, KG, L Schreiber, DG Petersen, KUKjeldsen, MA Lever, AD Steen, R Stepanauskas, M Richter, S Kleindienst, S Lenk, A Schramm, BB Jorgensen. 2013. Predominant archaea in marine sediments degrade detrital proteins. Nature. V. 496, pp. 215-218. (March 2013)
  • Zhaxybayeva, O, R Stepanauskas, NR Mohan, RT Papke. 2013. Cell sorting analysis of geographically separated hypersaline environments. Extremophiles. V. 17, pp. 265-275. (January 2013)
  • Rinke, C, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, A Darling, S Malfatti, BK Swan, EA Gies, JA Dodsworth, BP Hedlund, G Tsiamis, SM Sievert, WT Liu, JA Eisen, SJ Hallam, NC Kyrpides, R Stepanauskas, EM Rubin, P Hugenholtz, T Woyke. 2013. Insights into the phylogeny and coding potential of microbial dark matter. Nature. V. 499, pp. 431-437. (July 2013)
  • Swan, BK, B Tupper, A Sczyrba, FM Lauro, M Martinez-Garcia, JM Gonzalez, H Luo, JJ Wright, ZC Landry, NW Hanson, B Thompson, NJ Poulton, P Schwientek, S Gonzalex-Acinas, SJ Giovannoni, MA Moran, SJ Hallam, R Cavicchioli, T Woyke, R Stepanauskas. 2013. Prevalent genome streamlining and latitudinal divergence of marine bacteria in the surface ocean. Proceedings of the National Academy of Sciences. V. 110, pp. 11463-11468. (July 2013)
  • Fredrick, ND, JA Berges, BS Twining, D Nunez-Milland, FL Hellweger. 2013. Use of agent-based modeling to explore the mechanisms of intracellular phosphorus heterogeneity in cultured phytoplankton. Applied and Environmental Microbiology. V. 79 (14), pp. 4359-4368. (December 2013)
  • Wilhelm, SW, AL King, BS Twining, GR LeCleir, JM DeBruyn, RF Strzepek, CL Breene, S Pickmerre, MJ Ellwood, PW Boyd, DA Hutchins. 2013. Elemental quotas and physiology of a southwestern Pacific ocean plankton community as a function of iron availability. Aquatic Microbial Ecology. V. 68 (3), pp. 185-194. (March 2013)
  • Twining, BS, SB Baines. 2013. The trace metal composition of marine phytoplan kton. Annual Review of Marine Science. V. 5, pp. 191-215. (January 2013)
  • Ingall, ED, JM Diaz, AF Longo, M Oakes, L Finney, S Vogt, B Lai, PL Yager, B S Twining, J A Brandes. 2013. Role of biogenic silica in the removal of iron from the Antarctic seas. Nature Communications. V. 4, pp. 1981. (June 2013)
  • White, MM, DC McCorkle, LS Mullineaux, AL Cohen. 2013. Early exposure of bay scallops (Argopecten irradians) to high CO2 causes a decrease of larval shall growth. PLos One, Vol. 8 (4), e61065. (April 2013)
  • Reid, EL, KD Weynberg, J Love, MN Isupov, JA Littlechild, WH Wilson, SL Kelly, DC Lamb, MJ Allen. 2013. Functional and structural characterization of a viral cytochrome b5. FEBS Letters, V. 587, pp. 3633-3639. (December 2013)
  • Read, BA & 78 others including WH Wilson. 2013. Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature, V. 499, pp. 209-213. (July 2013)

2012

  • Carpenter LJ, SD Archer, R Beale. 2012. Ocean-atmosphere trace gas exchange. Critical Review. Chemical Society Reviews, V. 41, pp. 6473-6506.
  • Archer SD, FE Hopkins, SA Kimmance, J Stephens, RGJ Bellerby, KG Schulsa, J Pionek, A Engel. 2012. Contrasting response of DMS and DMSP to ocean acidification in Arctic waters. Biogeosciences Discussions, V. 9, pp. 12803-12843.
  • Hopkins FE, SA Kimmance, J Stephens, RGJ Bellerby, CPD Brussard, J Czerny, KG Schultz, SD Archer. 2012. Response of halocarbons to ocean acidification in the Arctic. Biogeosciences Discussions, V. 9, pp. 8199-8239.
  • Arrigo KR, DK Perovich, RS Pickart, ZW Brown, GL Van Dijken, KE Lowry, MM Mills, MS Palmer, WM Balch, F Bahr, NR Bates, C Benitez-Nelson, B Bowler, E Brownlee, JK Ehn, KE Frey, R Garley, SR Laney, L Lubelczyk, J Mathis, A Matsuoka, BG Mitchess, GW Moore, E Ortega-Retuerta, S Pal, CM Polashenski, RA Reynolds, B Schiever, HM Sosik, M Stephens, JH Swift. 2012. Massive phytoplankton blooms under Arctic sea ice. Science, V. 336 (6087), pp. 1408.
  • Balch WM, DT Drapeau, BC Bowler, TG Huntington. 2012. Step-changes in the physical, chemical and biological characteristics of the Gulf of Maine, as documented by the GNATS time series. Marine Ecology Progress Series, V. 450, pp. 11-35.
  • Caron DA, PD Countway, AC Jones DY Kim, A Schnetzer. 2012. Marine Protistan Diversity. In: Carlson, DA, Giovannoni, SJ. (eds) Annual Review of Marine Sciencel, V. 4, pp. 467-493.
  • Howard MDA, AC Jones, A Schnetzer, PD Countway, C Tomas, RM Kudela, K Hayashi, P Chia, DA Caron. 2012. Quantitative real-time phlymerase chain reaction for Cochlodinium Fulvescens (Dinophyceae), a potentially harmful dinoflagellate from California coastal waters. Journal of Phycology, V. 48, pp. 384-393.
  • Breier JA, D Gomez-Ibanez, E Reddington, J Huber, D Emerson. 2012. A precision multi-sampler for deep-sea huydrothermal microbial mat studies. Deep-Sea Research I, V. 70, pp. 83-90.
  • Emerson D, E Roden, BS Twining. 2012. The microbial ferrous wheel: iron cycling in terrestrial, freshwater, and marine environments. Frontiers in Microbiology, V. 3, pp. 1-2.
  • Emerson D. 2012. Biogeochemistry and microbiology of microaerobic Fe (II) oxidation. Biochemical Society Transactins, V. 40, pp. 1211-1216.
  • Fields DM, SD Shema, HI Browman, TQ Browne, AB Skiftesvik. 2012. Light primes the escape response of the Calanoid copepod, Calanus finmarchicus. PLoS ONE, V. 7(6): e39594.
  • Larsen PF. 2012. The macroinvertebrate fauna of rockweek (Ascophyllum nodosum) dominated low energy rocky shores of the Northern Gulf of Maine. Journal of Coastal Research, V. 28, pp. 36-42.
  • Martinez-Garcia M, D Brazil, NJ Poulton, BK Swan, ML Gomez, DED Masland, ME Sieracki, R Stepanauskas. 2012. Unveiling in situ interactions between marine protists and bacteria through single cell sequencing. The ISME Journal, V. 6(3), pp. 703-707.
  • Martinez-Garcia M, DA Brazil, BK Swan, C ARnosti, PSG Chain, KG Reitenga, G Xie, NJ Poulton, ML Gomez, DED Masland, B Thompson, WK Bellows, K Ziervogel, C Cho, S Ahmed, CD Gleasner, CJ Detter, R Stepanauskas. 2012. Capturing single cell genomes of active polysaccharide degraders: an unexpected contribution of Verrucomicrobia. PLoS ONE, V. 7(4), pp. 1-11.
  • Martinez-Garcia M, BK Swan, NJ Poulton, ML Gomez, DED Masland, ME Sieracki, R Stepanauskas.2012. High throughput single-cell sequencingidentifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton. The ISME Journal, V. 6, pp. 113-123.
  • Brandsma J, J Martinez Martinez, H Slagter, C Evans, C Brussard. 2012. Microbial biogeography of the North Sea during summer. Biogeochemistry. V. 113 (103), pp. 119-136.
  • Martinez Martinez J, DC Schroeder, WH Wilson. 2012. Dynamics and genotypic composition of Emiliania huxleyi and their co-occurring viruses during a coccolithophore bloom in the North sea. FEMS Microbiology and Ecology, V. 81(2), pp. 315-323.
  • Matrai PA, C Leck. 2012. A silver lining to Arctic clouds? Global Change, Issue 9, pp. 8-11.
  • Herrmann M, R Najjar, A Neeley, M Vila-Costa, JWH Dacey, G DiTullio, DJ Kieber, RP Kiene, PA Matrai, R Simo, M Vernet. 2012. Diagnostic modeling of dimethylsulfide production in coastal water west of the Antarctic Peninsula. Continental Shelf Research, V. 32(1), pp. 96-109.
  • Shepson PB, PA Ariya, C Deal, DJ Donaldson, TA Douglas, T Maksym, PA Matrai, L Russell, B Saenz, J Stefels, N Steiner. 2012. OASIS: Bringin scientists together from multiple disciplines to study changes and feedbacks in the polar environments. EOS. Transactions of the American Geophysical Union, V. 93(11), pp. 117-124.
  • Roden EE, JM BcBeth, M Blothe, EM Percak-Dennett, EJ Fleming, RR Holyoke, GW Luther, 3rd, D Emerson, J Schieber. 2012. The microbial ferrous wheel in a neutral-pH groundwater seep. Frontiers in Microbiology, V. 3, pp. 172.
  • Mumford AC, JL Barringer, WM Benzel, PA Reilly, LY Young. 2012. Microbial transformations of arsenic: mobilization from glauconitic sediments to water. Water Research, V. 46(9), pp. 2859-2868.
  • Nuester J, S Vogt, M Newville, AB Kustka, BS Twining. 2012. The unique biogeochemical signature of the marine diazotroph Trichodesmium. Frontiers in Microbiology, V. 3, pp. 1-15.
  • Nuester J, S Vogt, BS Twining. 2012. Localization of iron within centric diatoms of the genus Thalassiosira. Journal of Phycology, V. 48(3), pp. 626-634.
  • Nigro LM, K Harris, BN Orcutt, A Hyde, S Clayton-Luce, K Becker, A Teske. 2012. Microbial communities at the borehole observatory on the Costa Rica Rift flank. (Ocean Drilling Program Hole 896A) Frontiers in Extreme Microbiology, V. 3, pp. 232.
  • Edwards KJ, CG Wheat, BN Orcutt, S Hulme, K Becker, H Jannasch, A Haddad, T Pettigrew, W Rhinehart, K Grigar, W Bach, W Kirkwood, A Klaus. 2012. Design and deployment of borehole observatories and experiments during IODP Expedition 336, Mic-Atlantic Ridge flank at North Pond. In: Edwards, KJ and the expedition 336 Scientists. Proc. IODP, 336: Tokyo (Integrated Ocean Drilling Program Management International, Inc.) doi:10.2204/iodp.proc.336.109.2012.
  • Orcutt BN, RA Barco, SB Joye, KJ Edwards. 2012. Summary of carbon nitrogen, and iron leaching characteristics and fluorescence properties of materials considered for subseafloor observatory assembly. In: Edwards KJ and the Expedition 336 Scientists. Proc. IODP, 336: Tokyo (Integrated Ocean Drilling Program Management International, Inc.) doi: 10.2204/iodp.proc.336.108.2012.
  • Gao Q, C Leck, C Rauschenberg, PA Matrai. 2012. On the chemical dynamics of extracellular polysaccharides in the high Arctic surface microlayer. Ocean Science, ASCOS Special Issue, V. 8, pp. 401-418.
  • Del Campo J, F Not, I Form, R Massana, ME Sieracki. 2012. Taming the smallest predators of the oceans. The ISME Journal, V. 7(2), pp. 351-358.
  • Stepanauskas R, 2012. Single cell genomics: an individual look at microbes. Current Opinion in Microbiology, V. 15, pp. 613-620.
  • Lin H, BS Twining. 2012. Chemical speciation of iron in Antarctic waters surrounding free-drifting icebergs. Marine Chemistry, V. 128-129, pp. 81-91.
  • Bucci V, D Nunez-Milland, BS Twining,FL Hellweger. 2012. Microscale patchiness leads to large and important intraspecific internal nutrient heterogeneity in phytoplankton. Aquatic Ecology, V. 46, pp. 101-118.
  • King AL, SA Sanudo-Wilhelmy, PW Boyd, BS Twining, SW Wlhelm, C Breene, MJ Ellwood, DA Hutchins. 2012. A comparison of biogenic iron quotas during a diatom spring bloom using multiple approaches. Biogeosciences, V. 9, pp. 667-687.
  • Baines SB, BS Twining, MA Brezezinski, JW Krause, S Vogt, D Assael, H McDaniel. 2012. Significant silicon accumulation by marine picosyanobacteria. Nature Geoscience, V. 5, pp. 886-891.
  • Boyd PW, RF Strezepek, S Chiswell, H Change, JM DeBruyn, M Ellwood, K Kennan, AL King, EW Maas, S Nodder, SG Sander, P Sutton, BS Twining, SW Wilhelm, DA Hutchins. 2012. Microbial control of diatom bloom dynamics in the open ocean. Geophysical Research Letters, V.39, doi: 10.1029/2012GL053448.
  • Twining BS, SB Baines, S Vogt, DM Nelson, 2012. Role of diatoms in nickel biogeochemistry in the ocean. Global Biogeochemical Cycles, V. 26(4), doi: 10.1029/2011GB004233.
  • Vernet M, KL kSmith, AO Cefarelli, JJ Helly, RS Kaufmann, H Lin, DG Long, AE Murray, BH Robinson, HA Ruhl, TJ Shaw, AD Sherman, J S;printall, GR Stephenson, KM Stuart, BS Twining. 2012. Islands of ice: influence of free-drifting Antarctic icebergs on pelagic ecosystems. Oceanography, V. 25(3), pp. 38-39.
  • Mazard S, WH Wilson, DJ Scanlan. 2012. Dissecting the physiological response to phosphorus stress in marine Synechococcus isolates (Cyanophyceae). Journal of Phycology, V. 48, pp. 94-105.
  • Wilson WH, MJ Allen, A Pagarete. 2012. Coccolithovirus. The Springer Index of Viruses. In: Tidona C, Darai G (Eds), Springer, New HYork, pp. 1253-1257.
  • Yang EC, GH Boo, HJ Kim, SM Cho, SM Boo, RA Andersen, HS Yoon. 2012. Supermatrix data highlight the phylogenetic relationships of photosynthetic stramenopiles. Protist, V. 163(2), pp. 217-231.
  • Price DC, CX Chan, HS Yoon, EC Yang, H Qui, AP Weber, R Schwacke, J Gross, NA Blouin, C Lane, A Reyes-Prieto, DG Durnford, JA Neilsen, BF Lang, G Burger, JM Steiner, W Loffelhardt, JE Meuser, MC Posewitz, S Ball, MC Arias, B Henrissat, PM Coutinho, SA Ronsing, S Symeonidi, H Doddapaneni, BR Green VD Rajah, J Boore, D Bhattacharya. 2012. Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants. Science, V. 335(6070), pp. 843-847.
  • Debashish B, D Price, HS Yoon, EC Yang, NJ Poulton, RA Andersen. SP Das. 2012. Single cell genome analysis supports a link between phagotrophy and primary plastid endosymbiosis. Nature: Scientific Reports, V. 2, pp. 356.

2011

  • Li WKW, RA Andersen, DJ Gifford, LS Incze, JL Martin, CH Pilskaln, JN Rooney-Varga, ME Sieracki, WHWilson, NH Wolff. 2011. Planktonic microbes in the gulf of Maine area. PLoS One, V. 6(6), e20981.
  • Poulton AJ, JR Young, NR Bates, WM Balch, 2011. Bimetry of detached Emiliania huxleyi coccoliths along the Patagonian Shelf. Marine Ecology Progress Series, V. 443, pp. 1-17.
  • Balch WM, DT Drapeau, BC Bowler, ES Booth, E Lyczkowski, D Alley. 2011.The contribution of coccolithophores to the optical and inorganic carbon budgets during the Southern Ocean Gas Experiment: new evidence in support of the "Great Calcite Belt" hypothesis. Journal of Geophysical Research-Oceans. Special Issue, V. 116, CooF6,doi:10.1029/2011JCoo6941.
  • Balch WM, DT Drapeau, BC Bowler, ES Booth, A Poulton. 2011. Zonal and meridional pattersn of phytoplankton biomass and carbon dixation in the Equatorial Pacific Ocean, between 110 W and 140 W. Deep-Sea Research II, V. 58, pp. 400-416.
  • Landry MR, KE Selph, AG Taylor, D Decoma, WM Balch, RRR Bidigare. 2011. Phytoplankton growth, grazing and production balances in the HNLC Equatorial Pacific. Deep-Sea Research II, V. 58, pp. 524-535.
  • Brzezinski M, SB Baines, WM Balch, C Beucher, F Chai, RC Dugdale, JW Krause, MR Landry, A Marchi, C Measures, DM Nelson, A Parker, A Poulton, KE Selph, PG Strutton, AG Taylor, BS Twining. 2011. Co-limitation of diatoms by iron and silicic acid in the Equatorial Pacific. Deep-Sea Research II, V. 58, pp. 493-511.
  • Garneau ME, A Schnetzer, PD Countway, AC Jones, EL Seubert, DA Caron. 2011. Examination of the seasonal dynamics of the toxic dinoflagellate Alexandrium catenella at Redondo Beach, California, by quantitative PCR. Applied & Environmental Microbiology, V. 77(21), pp. 7669-7680.
  • Ki DY, PD Countway, RJ Gast, DA Caron. 2011. Rapid shifts in the structure and composition of a protistan assemblage during bottle incubations affect estimates of total protistan specied richness. Microbial Ecology, V. 62, pp. 383-398.
  • Schnetzer A, SD Moorthi, PD Countway, IC Gilg, DA Caron. 2011. Depth matters: microbial eukaryote diversity and community structure in the eastern North Pacific revealed through environmental gene libraries. Deep-Sea Research I, V. 58, pp. 16-26.
  • Steele JA, PD Countway, L Xia, PD vigil, JM Beman, DY Kim, CE Chow, R Sachdeva, AC Jones, MS Schwalbach, JM Rose, I Hewson, A Patel, F Sun DA Caron, JA Fuhrman. 2011. Marine bacterial, archaeal and protistan association networks reveal ecological linkages. ISME Journal, V. 5, pp. 1414-1425.
  • Singer E, D Emerson, EA Webb, RA Barco, JG Duenen, WC Nelson, CS Chan, LR Comolli, S Ferriera, J Johnson, JF Heidelberg, KJ Edwards. 2011. Mariprofundus ferrooxydans PV-1 the first genome of a marine Fe(II) exidizing zetaproteobacterium. PLoS ONE, V. 6(9), e25386.
  • Chan CS, SC Fakra, D Emerson, EJ Fleming, KJ Edwards. 2011. Lithotrophic iron-oxidizing bacteria produce organic stalks to control iron mineral growth: implications for biosignature formation. The ISME Journal, V. 5, pp. 717-727.
  • Edwards KJ, BGT Glazer, OJ Rouxel, W Bach, D Emerson, RE David, BM Toner, CS Chan, BM Tebo, H Straudigel, CL Moyer. 2011. Ultra-diffuse hudrothermanl venting suipports Fe-oxidizing bacteria and massive umber deposition at 5000m off Hawaii. The ISMEJournal, V. 5, pp. 1748-1758.
  • Roden EE, D Emerson. 2011. Rust never sleeps: a new wave for neutral-pH Fe redox cycling. Environmental Microbiology Reports. V. 3, pp. 1-26.
  • Browman, HI, J Yen, DM Fields, J-F St. Pierre, AB Skiftesvik. 2011. Fine-scale observations of the predatory behaviour of the carnivorous copepod Paraeuchaeta norvegica and the escape responses of their ichthyoplankton prey, Atlantic cod. Marine Biology, V. 158, pp. 2653-2660.
  • Fields DM, CMF Durif, RM Bjelland, SD Shema, AB Skiftesvik, HI Browman. 2011. Grazing rates of Calanus finmarchicus on Thalassiosira weissflogii cultured under different levels of ultraviolet radiation. PLoS One, V. 6(10), e26333.
  • Fleming EJ, EA Langdon, M Martinez-Garcia, R Stepanauskas, N Poulton, EDP Masland, D Emerson. 2011. What's new is old: resolving gthe identity of Leptothrix ochracea using single cell genomics, pyrosequencing and FISH. PLoS One, V. 6(3): e17769.
  • Weynberg KD, MJ Allen, IC Gilg, DJ Scanlan, WH Wilson. 2011. Genome sequence of Ostreoccoccus tauri virus OtV-2 throws light on the role of picoeukarote niche separation in the ocean. Journal of Virology, V. 85(9), pp. 4520-4529.
  • Martinez Martinez J, NJ Poulton, R Stepanauskas, ME Sieracki, WH Wilson. 2011. Targeted sorting of single virus-infected cells of the coccolithophore Emiliania Huxleyi. PLoS One, V. 6(7): e22520.
  • Halfacre JW, PB Shepson, WR Sinpson, TN Knepp, KA Pratt, PA Matrai, JW Bottenheim, DK Perovich, ME Baldwin, JD Fuentes. AGU Fall Meeting Abstracts 12/2011.
  • McAllister SM, RE Davis, JM McBeth, BM Tebo, D Emerson, CL Moyer. 2011. Biodiversity and emerging biogeography of the neutrophiliciron-oxidizing Zetaproteobacteria. Applied & Environmental Microbiology. V. 77, pp. 5445-5447.
  • McBeth JM, BJ Little, RI Ray, KM Farrar, D Emerson. 2011. Neutrophilic iron-oxidizing "Zetaproteobacteria" and mild steel corrosion in nearshore marine environments. Applied & Environmental Microbiology, V. 77, pp. 1405-1412.
  • Lin H, S Rauschenberg, CR Hexel, TJ Shaw, BS Twining. 2011. Free-drifting icebergs as sources of iron to the Weddell Sea. Deep-Sea Research II, V. 58, pp. 1392-1406.
  • Shimmield G. 2011. Introduction to the geochemistry of estuaries and coasts. In: Wolanski, E. and McLusky, DS. (eds.) Treatise on Estuarine and Coastal Science, V. 4, pp. 108, Waltham, Academic Press.
  • Heywood JL, ME Sieracki, W Bellows, NJ Poulton, R Stepanauskas. 2011. Capturing diversity of marine heterotrophic protists: one cell at a time. The ISME Journal, V. 5(4), pp. 674-684.
  • Karsenti E, SG Acinas, P Bork, C Bowler, D DeVargas, J Raes, M Sullivan, D Arendt, F Benzoni, JM Clavene, M Follows, G Gorsky, P Hingamp, D Iudicone, O Jaillon, S Kandels-Lewis, UKrzic, F Not, H Ogata, S Pesant, EG Reynaud C Sardet, ME Sieracki, S Speich, D Velayoudon, J Weissenbach. 2011. A holistic approach to marine ecosystems biology. PLoS Biology, V. 9(10): e1001177.
  • Woyke T, A Sczyrba, J Lee, C Rinke, D tighe, S Clingenpeel, R Malmstrom, R Stepanauskas, JF Chen. 2011. Decontamination of MDA reagents for single cell whole genome amplification. PLoS One, V. 6(10): e26161.
  • Ghai R, L Pasic, AB Fe3rnandez, AB Martin-Cuadrado, CM Mizuno, KD McMahon, RT Papke, R Stepanauskas, B Rodriguez-Brito, F Rohwer, C Sanchez-Porro, A Ventosa, F Rodriquez-Valera. 2011. New abundant microbial groups in aquatic hypersaline environments. Scientific Reports, V. 1:sre00135.
  • Stepanauskas R. 2011. Potential for chemilithoautotrophy among ubiquitous bacteria lineages in the dark ocean. Science, V. 333 (6047), pp. 1296-1300.
  • Twining BS, SB Baines, Jb Bozard, S Vogt, EA Walker, DM Nelson. 2011. Metal quotas of plankton in the equatorial Pacific Ocean. Deep-Sea Research II, V. 58 (3-4), pp. 325-341.
  • Baines SB, SB Twining, S Vogt, WM Balch, NS Fisher, D Nelson. 2011. elemental composition of equatorial Pacific diatoms exposed to additions of silicic acid and iron. Deep-Sea Research II, V. 58(3-4), pp. 512-523.
  • Pagarete A, G le Corguille, B Tiware, H Ogata, C de Vargas, WH Wilson, MJ Allen. 2011. Unveiling the transcriptional features associated with coccolithovirus infection of natural Emiliania huxleyi blooms. FEMS Microbiology Ecology, V. 78(3), pp. 555-564.
  • Rowe JM, MF Febre, D Gobena, WH Wilson, SW Wilhelm. 2011. Application of the major capsid protein as a marker of the phylogenetic diversity of Emiliania huxleyi viruses. FEMS Microbiology Ecology, V. 76(2), pp. 373-380.
  • Hurst CJ, WH Wilson. 2011. Coral Viruses. In: Studies in Viral Ecology, V. 2: Animal Host Systems (Ed: Christon J. Hurst), pp. 141-149. John Wiley & Sons, Inc.
  • Wilson WH, MJ Allen. 2011. Viruses of Algae (Phycodnaviruses) and Mimivirus. In: Fundamentals of Molecular Virology. Chapter 27. (Ed. Nicholas H. Acheson) John Wiley & Sons, Inc.
  • Wilson WH, MJ Allen. 2011. Viruses of Eukaryotic Algae. In: Studies in Viral Ecology, V. 1: Micro bial and Botanical Host Systems (Ed: Christon J. Hurst) pp. 193-207. John Wiley & Sons, Inc.
  • Wilson WH, JL Van Etten, DS Schroeder, K Nagasaki, C Brussaard, G Bratbak, C Suttle. 2011. Family: Phycodnaviridae. In: Virus Taxonomy, 9th Report of the ICTV (Ed: AMQ King), pp. 219-232. Elsevier, Inc.
  • Boo GH, SC Lindstrom, NC Klochkova, N Yotsukura, EC Yang, HG Kim, JR Waaland, GY Cho, Ka Miller, SM Boo. 2011. Taxonomy and biogeography of Agarum and Thalassiophyllum (Laminariales, Phaeophyceae) based on sequences of nuclear, microchondrial, and plastid marker. Taxon, V. 60(3), pp. 831-840.
  • Chan CX, EC Yang, T Banerjee, HS Yoon, PT Martone, JM Estevez, D Bhattacharya. 2011. Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes. Current Biology, V. 21(4), pp. 328-333.
  • Scott J, EC Yang, JA West, A Hyokoyama, HJ Kim, SL de Goer, CJ O'Kelly, E Orlova, SY Kim, JK Park, HS Yoon. 2011. On the genus Rhodella, the emended orders Dixoniellales and Rhodellales with a new order Glaucophaerales (Rhodellophyceae, Rhodophyta) Algae, V. 26(4), pp. 277-288.
  • Yang EC, J Scott, JA West, HS Yoon, A Yokoyama, U Karsten, SL de Goer, E Orlova. 2011. Erythrolobus australicus sp. Nov. (Porphyridiophyceae, Rhodophyta): a description based on several approaches. Algae, V. 26(2), pp. 167-180.
  • Yoon HS, DC Price, R Stepanauskas, VD Rajah, ME Sieracki, WH Wilson, EC Yang, S Duffy, D Bhattacharya. 2011. Single cell genomics reveals organismal interactions in uncultivated marine protists. Science, V. 332(6030), pp. 714-717.

2010

  • Boo SM, HS Kim, W Shin, GH Boo, SM Cho, BY Jo, JH Kim, EC Yang, PA Siver, AP Wolfe, D Bhatacharya, RA Andersen, HS Yoon. 2010. Complex phylogeographic patterns in the freshwater alga Synura provide new insights into ubiquity vs. endemism in microbial eukaryotes. Molecular Ecology, V. 19(19), pp. 4328-4338.
  • Balch, WM, BC Bowler, DT Drapeau, AJ Poulton, P Holligan. 2010. Biominerals and the vertical flux of particulate organic carbon from the surface ocean. Geochemical Research Letters, V. 37(22), L22605. (November 2010)
  • Fabry VJ, WM Balch. 2010. Direct measurements of calcification rates in planktonic organisms. In: Guide to Best Practices for Ocean Acidification Research and Data Reporting. U Riebesell, FJ Fabry, L Hansson, JP Gattuso (Eds.) Luxembourg, Publications Office of the European Union, pp. 201-212.
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